DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5196 and dhhc-4

DIOPT Version :9

Sequence 1:NP_650191.1 Gene:CG5196 / 41522 FlyBaseID:FBgn0038039 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001023033.1 Gene:dhhc-4 / 191420 WormBaseID:WBGene00014075 Length:405 Species:Caenorhabditis elegans


Alignment Length:289 Identity:77/289 - (26%)
Similarity:114/289 - (39%) Gaps:81/289 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LTTLYMNSMWWPPNKSFAGFAHQALF-----------LLLSTLATFNYVMATLTGPGLMPKQWHP 81
            |.|:|..: |.||.|.....|.:|.:           |.||.:|....:...:.|          
 Worm    75 LRTVYTKA-WKPPQKYCIEGASKATYESVKDDERQLQLFLSDIARERDLTLLVRG---------- 128

  Fly    82 KDPKDAQF---LQYCKKCEGYKAPRSHHCRKCDRCVKKMDHHCPWINHCVGWANHAYFTYFLLFS 143
                   |   :::|.||...|..|||||..|::||.|.||||||:|:||.:.|:.||..||.:.
 Worm   129 -------FDHGIRFCDKCCCIKPDRSHHCSMCEQCVLKFDHHCPWVNNCVNFGNYKYFILFLAYG 186

  Fly   144 ILGSL---QGTVVLCCSFWRGIY----RYY-----YLTHGLAHLASV----QFTL--LSIIMCIL 190
            .:..:   ..|:.....|||..|    :.|     .:...|.||.:|    :|.|  |..:.|:.
 Worm   187 FIFCIWIAATTLPSFIDFWRHEYDMNKKQYDSIDSVIQRNLKHLHTVLSNGRFPLVFLLFLSCMF 251

  Fly   191 GMGLAIGVVIGLSMLLFIQLKTIVNNQTGIEIWIVEKAIYRRYRNADCDDEFLY-PYDLGWRANL 254
            .        :.||.|.|..|.....|:|.:|          .:|....|.::.. .::.|.|||.
 Worm   252 S--------LSLSFLFFYHLYLTAKNRTTVE----------SFRAPMIDGKYAKDAFNHGIRANY 298

  Fly   255 RLVFNDECQKRGDGIEW--PVV----EGC 277
            |.:|...      .:.|  ||.    :||
 Worm   299 REIFGSH------PLYWFLPVPSSIGDGC 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5196NP_650191.1 zf-DHHC 89..223 CDD:279823 50/154 (32%)
dhhc-4NP_001023033.1 zf-DHHC 131..274 CDD:279823 48/150 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.