DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sccpdh2 and AT5G39410

DIOPT Version :9

Sequence 1:NP_650190.1 Gene:Sccpdh2 / 41521 FlyBaseID:FBgn0038038 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_568564.1 Gene:AT5G39410 / 833937 AraportID:AT5G39410 Length:454 Species:Arabidopsis thaliana


Alignment Length:459 Identity:157/459 - (34%)
Similarity:237/459 - (51%) Gaps:58/459 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DAIIFGASGFTGKYTVFEAV--------SVLKGLQWGIAGRNQEKLQSVLREMGAKSKTDLSQTP 63
            |.:|.|||||||||.|.||:        |.||.|  .:||||..:|...| |..|:.....|...
plant    12 DMVILGASGFTGKYVVREALKFLQTPSSSPLKSL--ALAGRNPTRLTQSL-EWAARPNPPPSSVA 73

  Fly    64 IVIADVNNEASLLEMAKRCRILVNTAGPYRFFGERVVRACIEAGTHHVDVSGEPQYMETMQLRYH 128
            |:.||.::..||..:..:.::::|..||:|..|:.||.||.::|..::|:||||::||.|:..||
plant    74 ILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYLDISGEPEFMERMEANYH 138

  Fly   129 DLAKERGVYVISACGFDSIPADMGVTFVEKNF--DGVVNSVENFVHLGVKGGTKGTGSAALNTGT 191
            |.|:|.|..::||||||||||::|:.|..|.:  ..|.|.:|  .:|.::...|..|    |.||
plant   139 DRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIE--AYLSLESDKKIAG----NFGT 197

  Fly   192 WESAIHAIANRSESVAIRRKLFPERLPNFHPALKSRSPLSRAAEVDN-KVI----LPFPETDRSV 251
            :|||:..:||..:...:||.. |.|     |......|.::...::| |.|    |..|..|..|
plant   198 YESAVLGVANAEKLKELRRSR-PRR-----PRPTICGPPAKGPTLENQKTIGLWALKLPSADAVV 256

  Fly   252 VMRSQRFLYE--------------LEKK-------RPVQMQAYMTYPSWFAASVVVLFASIIGIM 295
            |.|:...|.|              ::|:       :|......:|..|.|.....|.....:|::
plant   257 VRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVKITSKSLFGIFRYVTLGVSLGLL 321

  Fly   296 AKFSFGRQLLLKYPTVFSGGMASREGPSEARMERSFFRMTMKATGWPKSEKLAETTDQYTSPPTK 360
            :||||||.||||:|:|||.|...::||||..:|.:.|:|.....|: ..|.||...:  |.|..:
plant   322 SKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFKMWFIGRGY-SEESLASQGE--TKPDLE 383

  Fly   361 TLTVRVTGPNPGYGSTCVALLSTAKTILNESDKMPGSGGVLPPGAAFRGTSLISELEKHEHGIKF 425
            .:| |::||..||.:|.:.|:.....:|.:.:.:. .|||..||..|..|.:...||  ::||.|
plant   384 IIT-RISGPEIGYITTPITLVQCGLIVLGQRESLV-KGGVYTPGIVFGSTDIQQRLE--DNGISF 444

  Fly   426 EIVA 429
            |:::
plant   445 ELIS 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sccpdh2NP_650190.1 COG3268 7..416 CDD:225807 151/444 (34%)
Sacchrp_dh_NADP 9..139 CDD:281434 55/137 (40%)
AT5G39410NP_568564.1 COG3268 8..445 CDD:225807 155/454 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 125 1.000 Domainoid score I1791
eggNOG 1 0.900 - - E1_COG3268
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9334
Inparanoid 1 1.050 222 1.000 Inparanoid score I1197
OMA 1 1.010 - - QHG56565
OrthoDB 1 1.010 - - D887497at2759
OrthoFinder 1 1.000 - - FOG0002586
OrthoInspector 1 1.000 - - otm2878
orthoMCL 1 0.900 - - OOG6_101495
Panther 1 1.100 - - O PTHR12286
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1697
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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