DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sccpdh2 and sccpdh

DIOPT Version :9

Sequence 1:NP_650190.1 Gene:Sccpdh2 / 41521 FlyBaseID:FBgn0038038 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_002931533.2 Gene:sccpdh / 100379674 XenbaseID:XB-GENE-940936 Length:429 Species:Xenopus tropicalis


Alignment Length:436 Identity:170/436 - (38%)
Similarity:262/436 - (60%) Gaps:25/436 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KKLDAIIFGASGFTGKYTVFEAVSVL-------KGLQWGIAGRNQEKLQSVLREMGAK-SKTDL- 59
            ::...:|.|||||||::.|.|.....       .||:|.:||||::||:.||:....: ||..| 
 Frog     5 RQYQLVILGASGFTGQFVVEEVARAADSEDFRGPGLRWAVAGRNKKKLEEVLQTASQRLSKPQLK 69

  Fly    60 SQTPIVIADVNNEASLLEMAKRCRILVNTAGPYRFFGERVVRACIEAGTHHVDVSGEPQYMETMQ 124
            |...|::.||::..||.||.|:..::::..|||||:||.||:||:|.|.|.||:|||||::|.|.
 Frog    70 SDVDIILCDVSDPPSLAEMCKKATVVLDCVGPYRFYGEPVVKACVENGAHFVDISGEPQFLEGMY 134

  Fly   125 LRYHDLAKERGVYVISACGFDSIPADMGVTFVEKNFDGVVNSVENFVHLGVKGGTKGTGSAALNT 189
            |:|:..|.|:|||::.:.||||||||:||.|...:..|.:.:||:|  |.:|.|.|||   .::.
 Frog   135 LKYNSQAAEKGVYIVGSSGFDSIPADLGVLFTRNSLKGTLTAVESF--LSLKSGPKGT---CIHD 194

  Fly   190 GTWESAIHAIANRSESVAIRRKLFPERLPNFHPALKSRSPLSRAAEVDNKVILPFPETDRSVVMR 254
            |||:||:|.||:......:|::|..:.||.....:|.|.|:..:.|: .:..:||...|.|||.|
 Frog   195 GTWQSAVHGIADEGNLRKLRKQLAYKPLPVVGKKMKRRGPVFYSNEL-KEYAIPFLGADASVVRR 258

  Fly   255 SQRFLYELEKKRPVQMQAYMTYPSWFAASVVVLFASIIGIM-AKFSFGRQLLLKYPTVFSGGMAS 318
            :||:|||..::.|||..||::. ....:.:.::||.:..:: .|||.||:||:|:|..||.|..|
 Frog   259 TQRYLYENLQESPVQYAAYVSV-GGLTSVIKLMFAGLFFLLFTKFSCGRKLLIKFPKFFSFGYFS 322

  Fly   319 REGPSEARMERSFFRMTMKATGWPKSEKLAETTDQYTSPPTKTLTVRVTGPNPGYGSTCVALLST 383
            :|||::.:|:.:.|.||....|:.:.....:.|      |...:..:|:||...|.:|.:|::.|
 Frog   323 KEGPTQEQMDGASFTMTFFGEGYSQGYNPQDGT------PNVKICTQVSGPEVAYVATPIAMVQT 381

  Fly   384 AKTILNESDKMPGSGGVLPPGAAFRGTSLISELEKHEHGIKFEIVA 429
            ..|||.:|..:|.||||..|||||..|.||..|.|  .|:.|.:::
 Frog   382 GVTILKDSSLLPKSGGVYTPGAAFSKTKLIERLNK--AGLHFTVIS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sccpdh2NP_650190.1 COG3268 7..416 CDD:225807 166/418 (40%)
Sacchrp_dh_NADP 9..139 CDD:281434 63/138 (46%)
sccpdhXP_002931533.2 COG3268 1..422 CDD:225807 169/431 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3204
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9334
Inparanoid 1 1.050 323 1.000 Inparanoid score I2463
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D302978at33208
OrthoFinder 1 1.000 - - FOG0002586
OrthoInspector 1 1.000 - - otm48730
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1697
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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