Protein Alignment DNAlig3 and LIG1

DIOPT Version :9

• Sequence 1: NP_650187.2
• Gene: DNAlig3 / 41518
• FlyBaseID: FBgn0286075
• Length: 806
• Species: Drosophila melanogaster
• Sequence 2: NP_172293.2
• Gene: LIG1 / 837333
• AraportID: AT1G08130
• Length: 790
• Species: Arabidopsis thaliana
• Alignment Length: 651
• Identity: 163/651 - (25%)
• Similarity: 266/651 - (40%)
• Gaps: 119/651 - (18%)

  Fly    12 ILTRLLCNKMASKGLHNEDNKLDTFRRICDEIAGESSYLKKAERLQRFFEKGSSGKGFKGDTVLW 76
            ::|.:|||.:.:......::.:.|.....:|||
plant   195 VITDILCNMLRTVIATTPEDLVATVYLSANEIA-------------------------------- 227

  Fly    77 VQFLIPAANQRVYNLQNKALIKLFSRIFNADQQQMHLDLEQDGDVSETLR-KHFAASKKLKPQKQ 140
                 ||.......:....:||..|..|...:..:.....:.||:....: .....:...||:..
plant   228 -----PAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQTMMFKPEPL 287

  Fly   141 SKLYLQEVEEMLLHLVERTKEDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHILDAFG 205
            :.:.:.:....:.....:...:::.:.::.|....||.:.....||::..||:....:.:|.|.|
plant   288 TVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKLRLGFSGQTVLAALG 352

  Fly   206 PDAYPAYQSSRDLVAIVEQFATKENKNYASSPVKKTKKTSSSAIQVM------------------ 252
            .            .|:..:..:|...| ..||:::..|.......|:
plant   353 Q------------AAVYNEEHSKPPPN-TKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNL 404

  Fly   253 ---------TPISPMLASPCKSVEDAFKKSPTGLYS-EIKYDGERVQIH-KQGNDFKFFSRNLK- 305
                     .||.||||.|.|.|.:...|....::: |.||||||.||| .:...|:.:|||.:
plant   405 PKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDGTFEIYSRNAER 469

  Fly   306 -----PVVDHKIRALKKYIPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAH-KKQTFAN--- 361
                 |.|...:..|||      |.....|||.|::..|.:...:|||..|... :|....|
plant   470 NTGKYPDVALALSRLKK------PSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIK 528

  Fly   362 AAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIQPIKSHVQLSESEFLKTTRELAAMTARVLHA 426
            ..||:|.||.:..:|:.|.|...:.|||.|.::.:....:.|.:.:.......|:.......:..
plant   529 VGVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDPGYFQFATAVTSNDIDEIQKFLDASVDV 593

  Fly   427 NLEGVVLKSPTS--TYQPGKR--NWLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGGTLSIFLM 487
            ..||:::|:..|  ||:|.||  ||||:||||:  ..:.|:.|||.:.|::|.||:.|....||:
plant   594 GCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYM--DSIGDSVDLVPIAAFHGRGKRTGVYGAFLL 656

  Fly   488 GCYDAFGRLWKTVTKVHSGLDDATNAEVHKSLIKLTERADANAIP-SWLLCSKSLVPDVLAKDPM 551
            .|||.....::::.|:.:|..||...|...||     |:...|.| .:.....||.|||.. :|.
plant   657 ACYDVDKEEFQSICKIGTGFSDAMLDERSSSL-----RSQVIATPKQYYRVGDSLNPDVWF-EPT 715

  Fly   552 KMPVWEITGAEFTKSDAHTAS--------GISVRFPRITRRRSDKSAKEANDLAHLEDLFEASKS 608
            :  |||:..|:.|.|..|.|:        |||:||||:.|.|.||..:||.....:.||::|.|.
plant   716 E--VWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADLYQAQKH 778

  Fly   609 N 609
            |
plant   779 N 779

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
DNAlig3	NP_650187.2	DNA_ligase_A_N	36..200	CDD:282522	20/164 (12%)
		dnl1	88..604	CDD:273147	150/568 (26%)
		Adenylation_DNA_ligase_III	242..454	CDD:185712	72/254 (28%)
		OBF_DNA_ligase_III	460..598	CDD:153436	51/146 (35%)
LIG1	NP_172293.2	PLN03113	49..790	CDD:215584	163/651 (25%)
		DNA_ligase_A_N	176..347	CDD:282522	25/188 (13%)
		Adenylation_DNA_ligase_I_Euk	407..625	CDD:185710	70/223 (31%)
		OBF_DNA_ligase_I	630..775	CDD:153438	53/152 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1793
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D274264at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820