DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNAlig3 and K07C5.3

DIOPT Version :9

Sequence 1:NP_650187.2 Gene:DNAlig3 / 41518 FlyBaseID:FBgn0286075 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_505659.1 Gene:K07C5.3 / 179441 WormBaseID:WBGene00010626 Length:493 Species:Caenorhabditis elegans


Alignment Length:249 Identity:64/249 - (25%)
Similarity:121/249 - (48%) Gaps:31/249 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NEDNKLDTFR---RICDEIAGESSYLKKAERLQRFFEKGSSGKGFKGDTVLWVQFLIPAANQRVY 89
            ||::..::|.   ::|..:...|...:|:..:....:|    |.|.||.:||:.|||..::||.|
 Worm   158 NEESDFNSFYKFVKVCSVLKEISVKSEKSAVITSLLQK----KNFDGDLMLWLTFLIRESDQRSY 218

  Fly    90 NLQNKALIKLFSRIFNADQQQMHLDLEQDGDVSETLRKHFAASKKLKPQKQSKLYLQEVEEMLLH 154
            |:.::.||:.|::|.:..:.::...:.:..|::.:: .| |..||:..:| .|..||:::..|..
 Worm   219 NITDEKLIQYFAKILDMGESKIQKYVTKSNDIALSI-SH-AHEKKVTNEK-GKWSLQKLDRYLEK 280

  Fly   155 LVERTKEDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHILDAFGPDAYPAYQSSRDLV 219
            |.:...:|.....|:....:....:|...|||::.:|..:|.|..||....|.|...:||: .|.
 Worm   281 LSKIEDDDAILSHLKFAAKRMRHDELDILIRLIRKELDTDADASIILKGVHPKAPEIFQSN-GLD 344

  Fly   220 AIVEQFATKENKNYASSPVKKTKKTSSSAIQVMTPISPMLASPCKSVEDAFKKS 273
            :::|::...:.:..|.      :|||||..:|..|              :||||
 Worm   345 SVIEKYYNNDFEKSAQ------QKTSSSKNKVAEP--------------SFKKS 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNAlig3NP_650187.2 DNA_ligase_A_N 36..200 CDD:282522 42/166 (25%)
dnl1 88..604 CDD:273147 46/186 (25%)
Adenylation_DNA_ligase_III 242..454 CDD:185712 11/32 (34%)
OBF_DNA_ligase_III 460..598 CDD:153436
K07C5.3NP_505659.1 zf-PARP 12..102 CDD:366219
DNA_ligase_A_N 165..317 CDD:377398 39/158 (25%)
MSCRAMM_SdrC <358..451 CDD:380146 12/41 (29%)
zf-CCHH 469..490 CDD:370948
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157574
Domainoid 1 1.000 58 1.000 Domainoid score I7188
eggNOG 1 0.900 - - E1_COG1793
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3614
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106861
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3850
SonicParanoid 1 1.000 - - X6002
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.620

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