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Protein Alignment CG34402 and Myl12a
DIOPT Version :9
Sequence 1: | NP_001097756.1 |
Gene: | CG34402 / 41513 |
FlyBaseID: | FBgn0085431 |
Length: | 695 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006245729.1 |
Gene: | Myl12a / 501203 |
RGDID: | 1309537 |
Length: | 178 |
Species: | Rattus norvegicus |
Alignment Length: | 151 |
Identity: | 31/151 - (20%) |
Similarity: | 42/151 - (27%) |
Gaps: | 70/151 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 442 ENSTGCQPGDALHVVTELRGRYETQELLCGAFLPKPLMSSGQQLHLQFVGKYPPTMTNKVQYYGF 506
:|..|....:.||.:....|:..|.|.|.......| |....||
Rat 49 QNRDGFIDKEDLHDMLASMGKNPTDEYLDAMMNEAP-------------GPINFTM--------- 91
Fly 507 RAEYRFLTNFGIMSGIQKEGCSFVYNSSERISGLFHSPNFPGYYLENVVCNYYFYGASDERVVLH 571
|||.|| |:::|. .| |:|:.| .
Rat 92 -----FLTMFG-----------------EKLNGT--DP-------EDVIRN-------------A 112
Fly 572 FTYFDIEGIGSCDHQTASDYI 592
|..||.|.||:.. .||:
Rat 113 FACFDEEAIGTIQ----EDYL 129
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG34402 | NP_001097756.1 |
CUB |
195..318 |
CDD:238001 |
|
CUB |
<414..512 |
CDD:238001 |
12/69 (17%) |
CUB |
527..644 |
CDD:238001 |
14/66 (21%) |
Myl12a | XP_006245729.1 |
FRQ1 |
25..175 |
CDD:227455 |
31/151 (21%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0031 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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