DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sol1 and Myl12a

DIOPT Version :10

Sequence 1:NP_001097756.1 Gene:Sol1 / 41513 FlyBaseID:FBgn0085431 Length:695 Species:Drosophila melanogaster
Sequence 2:XP_006245729.1 Gene:Myl12a / 501203 RGDID:1309537 Length:178 Species:Rattus norvegicus


Alignment Length:151 Identity:31/151 - (20%)
Similarity:42/151 - (27%) Gaps:70/151 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 ENSTGCQPGDALHVVTELRGRYETQELLCGAFLPKPLMSSGQQLHLQFVGKYPPTMTNKVQYYGF 506
            :|..|....:.||.:....|:..|.|.|.......|             |....||         
  Rat    49 QNRDGFIDKEDLHDMLASMGKNPTDEYLDAMMNEAP-------------GPINFTM--------- 91

  Fly   507 RAEYRFLTNFGIMSGIQKEGCSFVYNSSERISGLFHSPNFPGYYLENVVCNYYFYGASDERVVLH 571
                 |||.||                 |:::|.  .|       |:|:.|             .
  Rat    92 -----FLTMFG-----------------EKLNGT--DP-------EDVIRN-------------A 112

  Fly   572 FTYFDIEGIGSCDHQTASDYI 592
            |..||.|.||:..    .||:
  Rat   113 FACFDEEAIGTIQ----EDYL 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sol1NP_001097756.1 CUB 195..318 CDD:238001
CUB <414..512 CDD:238001 12/69 (17%)
CUB 527..644 CDD:238001 14/66 (21%)
Myl12aXP_006245729.1 PTZ00184 31..169 CDD:185504 31/151 (21%)
Blue background indicates that the domain is not in the aligned region.

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