DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34402 and CG32206

DIOPT Version :9

Sequence 1:NP_001097756.1 Gene:CG34402 / 41513 FlyBaseID:FBgn0085431 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_788538.2 Gene:CG32206 / 40105 FlyBaseID:FBgn0052206 Length:1278 Species:Drosophila melanogaster


Alignment Length:796 Identity:147/796 - (18%)
Similarity:235/796 - (29%) Gaps:281/796 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LTMPAASLALGLTVVLLAT--------------GNGQSQQ-AVTNSKQSHFWLDCS-----CLHL 56
            |.:||      |.||||||              |:|.|.. .|...|......||:     ..|.
  Fly    31 LLLPA------LLVVLLATTLGLACRVSEFSCKGSGNSGTICVPLDKYCDGRSDCADGSDEPKHC 89

  Fly    57 SERNAT----------------QWGR------LAINAS-HSLGAKNNCLMIFIAG-----MDDEL 93
            |..|.|                ||.:      |...|| |..|   :.:.|...|     .|:.:
  Fly    90 SVCNRTYYGDIGRTYAIKVPTPQWNKLPFLCHLTFTASGHDQG---DIVQIIFDGFTVGRFDEGM 151

  Fly    94 VAFQLEQLQLR-------AGCLDSVDIFPYLREPVIENATLAADTFCQHSRERSATPIYSAGRLL 151
            |...::..:..       .||.:.......|..|      ....::|              |:..
  Fly   152 VDTDVDGYETNLSPTGELPGCPEGFMQLSELGRP------FTGGSWC--------------GKAT 196

  Fly   152 GLRLRFQQPPTDLAS-------WNLTLNASYRFLKRENF--RTD--------------GRLVPHS 193
            |.:|.|.:..|..||       .|:.....:.|..|..|  ::|              ||:.|.:
  Fly   197 GPQLYFSETSTVTASVKVFHPPRNIRDEKPFEFSIRYKFISQSDAVVRYGLPDKPLELGRVTPGT 261

  Fly   194 FCDFYFFASLSGEEANMGQGYFHSPQFPAHYPAHIKCAYKF--------------IGRPDTHVEI 244
            :|...|      :|....:....||.:|..||.::.|.:..              :.:.:.|..:
  Fly   262 YCTRQF------DECYRNKCRLQSPNYPGMYPRNVTCYWTIRQKEVPTSKHAMIAVSQENQHKAL 320

  Fly   245 L------FEELQLPPVVSGGC--QLDALTLFDAESAHMNSVIDVICSSRPTRRLVSTGPDLLLEF 301
            :      |.:..........|  :.|.|..:|..|.: :.|:...|......|:||.||::|:.|
  Fly   321 VKRSIASFNKTSRSIRAWSDCTGERDHLIFYDGSSTN-DPVLAKYCGGDWLPRVVSRGPEMLVAF 384

  Fly   302 NASSNRTAKGFRGKYKFVSNDLGVPNASVPPPAVLEAASVVVKQEKLQQEQASAAKENSLMSDVE 366
            ::|.      |....:     .|:||....    |:...:....:.....|.:            
  Fly   385 HSSP------FSAPLQ-----QGIPNRGFE----LDVDILFTDSDSFDFAQGT------------ 422

  Fly   367 LSKPGRSFEQCKQTFDSRVNKSGIFDSNQLLLAKHALGGVVIGGSRVL----QCRYEFEAQAPER 427
                       |...:..:|.|   :.:.:|.::....|.::.....|    .|.|.|.....:.
  Fly   423 -----------KNLCEFHINAS---NPDDVLFSRRGRMGRIVSPRHTLPPNTTCTYHFHGYPGDL 473

  Fly   428 VQIRFHDFNV----PTEHENSTGCQPGDALHVVTELR-----GRY----ETQELLCGAFLPKPLM 479
            :.:.|..:|:    ...|:|:| ....|....:|.||     |.|    .|.........|.|:.
  Fly   474 IWLSFTSYNLQILQQAIHDNNT-LGRSDLPPWITRLRMWDSYGTYVPMKSTSSTTGQPPPPPPVA 537

  Fly   480 SSGQQLHLQFVGKYPPTMTNKVQY-------------------------------YG------FR 507
            ||...      ||  ||:.|:..|                               ||      |.
  Fly   538 SSADG------GK--PTLLNQSNYGSYYYSASNPKLNRNLRVNIDNAWNPVDTYIYGPTQSSVFN 594

  Fly   508 AEYRFLTNFGIMSGIQKEGCSFVYNSSERISGLFHSPNFPGYYLENVVCNYYFYGASDERVV--- 569
            .|.::   .|...|....|.:....|.:.|||:..|            .||...|.|.:.|.   
  Fly   595 QENKY---SGYQGGGPGGGSTGSAGSGKTISGVKDS------------LNYISSGKSSKEVSAAA 644

  Fly   570 --------------------LHFTYFDIEGIGSCDHQTASDYIEFSNFMSTDRKFSRYCGKLPDF 614
                                |....:|.|....|||......:..|:.:....| .|.|..|..:
  Fly   645 VVSSDRNSAVALMSTKGKRRLMLEIYDYETPKLCDHTAIGSGVSGSSAVMGGNK-QRPCSPLESY 708

  Fly   615 EMRSDGRFFRVTLHSN 630
            .  |.||..::..|::
  Fly   709 V--STGRDLKLEFHTH 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34402NP_001097756.1 CUB 195..318 CDD:238001 27/144 (19%)
CUB <414..512 CDD:238001 30/151 (20%)
CUB 527..644 CDD:238001 25/127 (20%)
CG32206NP_788538.2 LDLa 49..85 CDD:197566 7/35 (20%)
CUB 276..404 CDD:238001 27/143 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47537
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.