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Protein Alignment CG34402 and sqh
DIOPT Version :9
| Sequence 1: | NP_001097756.1 |
Gene: | CG34402 / 41513 |
FlyBaseID: | FBgn0085431 |
Length: | 695 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001284928.1 |
Gene: | sqh / 31554 |
FlyBaseID: | FBgn0003514 |
Length: | 174 |
Species: | Drosophila melanogaster |
| Alignment Length: | 184 |
Identity: | 38/184 - (20%) |
| Similarity: | 56/184 - (30%) |
Gaps: | 81/184 - (44%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 442 ENSTGCQPGDALHVVTELRGRYETQELLCGAFLPKPLMSSGQQLHLQFVGKYPPTMTNKVQYYGF 506
:|..|....:.||.:....|:..|.:.|.|.....| |....||
Fly 45 QNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAP-------------GPINFTM--------- 87
Fly 507 RAEYRFLTNFGIMSGIQKEGCSFVYNSSERISGLFHSPNFPGYYLENVVCNYYFYGASDE----- 566
|||.|| ||:.|. .| |:|:.| .:|..||
Fly 88 -----FLTLFG-----------------ERLQGT--DP-------EDVIKN--AFGCFDEENMGV 119
Fly 567 ------RVVL-----HFTYFDIEGIGSCDHQTAS------DYIEFSNFMSTDRK 603
|.:| .||..|::.: ::.|. ||:||:..:....|
Fly 120 LPEDRLRELLTTMGDRFTDEDVDEM----YREAPIKNGLFDYLEFTRILKHGAK 169
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG34402 | NP_001097756.1 |
CUB |
195..318 |
CDD:238001 |
|
| CUB |
<414..512 |
CDD:238001 |
12/69 (17%) |
| CUB |
527..644 |
CDD:238001 |
21/99 (21%) |
| sqh | NP_001284928.1 |
FRQ1 |
15..170 |
CDD:227455 |
38/184 (21%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0031 |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
0 | 0.000 |
Not matched by this tool. |
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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