DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34402 and CSMD3

DIOPT Version :9

Sequence 1:NP_001097756.1 Gene:CG34402 / 41513 FlyBaseID:FBgn0085431 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_937756.1 Gene:CSMD3 / 114788 HGNCID:19291 Length:3707 Species:Homo sapiens


Alignment Length:583 Identity:117/583 - (20%)
Similarity:191/583 - (32%) Gaps:176/583 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 TPIYSAGRLLGLR----------LRFQQPPTDLASWNLTLNASYRFLKRENFRTDGRLVPHSFCD 196
            ||:|      |:|          |||:      ..:...|......:.:||.:....:   ..| 
Human   669 TPLY------GIREGDGFSNRDVLRFE------CQFGFELIGEKSIVCQENNQWSANI---PIC- 717

  Fly   197 FYFFASLSGEEANMGQGYFHSPQFPAHYPAHIKCAYKFIGRPDTHVEILFEELQLPPVVSGGCQL 261
              .|..||...|.||.  ..||.:|..|..::.|.:..|..|.:.:.:.|.:..|.      .|.
Human   718 --IFPCLSNFTAPMGT--VLSPDYPEGYGNNLNCIWTIISDPGSRIHLSFNDFDLE------SQF 772

  Fly   262 DALTLFDAESAHMNSVIDVICSSRPTRRLVSTGPDLLLEFNASSNRTAKGFRGKYK-FVSNDLGV 325
            |.|.:.|.:|.. :.::.....:.....|.|....|.|||.|..:.:.:||...|. |..|:  .
Human   773 DFLAVKDGDSPE-SPILGTFTGAEVPSHLTSNSHILRLEFQADHSMSGRGFNITYNTFGHNE--C 834

  Fly   326 PNASVPPPA-------VLEAASVVVKQEKLQQEQASAAKENSLMSDVELSKPGRSFEQCKQTFDS 383
            |:..:|..|       .|.::..|:.:|...:.|.:......||                   |.
Human   835 PDPGIPINARRFGDNFQLGSSISVICEEGFIKTQGTETITCILM-------------------DG 880

  Fly   384 RVNKSGIFDSNQLLLAKH--ALGGVVIGG------SRVLQCRYEFEAQAPERVQIRFHDFNVPTE 440
            :|..||:..........|  |..||::..      ...|.|.:..||:....::|.|..|.....
Human   881 KVMWSGLIPKCGAPCGGHFSAPSGVILSPGWPGYYKDSLNCEWVIEAEPGHSIKITFERFQTELN 945

  Fly   441 HENSTGCQPGDALHVVTELRGRYETQELLCGAFLPKPLMSSGQQLHLQFVGKYPPTMTNKVQYYG 505
            ::   ..:..|..::::.|.|.|.      |..:|:.|.||...::|.|      |..|.....|
Human   946 YD---VLEVHDGPNLLSPLLGSYN------GTQVPQFLFSSSNFIYLLF------TTDNSRSNNG 995

  Fly   506 FRAEYRFLT--------------------NFGIMSGIQKEGCSFVYNSSERI------------- 537
            |:..|..:|                    :|.|.|.:     ||..:|..|:             
Human   996 FKIHYESVTVNTYSCLDPGIPVHGRRYGHDFSIGSTV-----SFSCDSGYRLSHEEPLLCEKNHW 1055

  Fly   538 -------------------SGLFHSPNFPGYYLENVVCNYYFYGASDERVVLHFTYFDIEGIGSC 583
                               ||...||.:|.:|..::.|.:.......:.|..:|..|.:|     
Human  1056 WSHPLPTCDALCGGDVRGPSGTILSPGYPEFYPNSLNCTWTVDVTHGKGVQFNFHTFHLE----- 1115

  Fly   584 DHQTASDYIEFSNFMSTDRKFSRYCGK-LP-------------------DFEMRSDGRFFRVT 626
            ||.   ||:..:...|..:..:|..|. ||                   ||.:..:|  |.:|
Human  1116 DHH---DYLLITENGSFTQPLARLTGSDLPPTINAGLYGNFRAQLRFISDFSISYEG--FNIT 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34402NP_001097756.1 CUB 195..318 CDD:238001 31/123 (25%)
CUB <414..512 CDD:238001 23/97 (24%)
CUB 527..644 CDD:238001 29/152 (19%)
CSMD3NP_937756.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
CUB 65..171 CDD:238001
CCP 178..236 CDD:153056
CUB 257..343 CDD:238001
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..435
CCP 486..544 CDD:153056
CUB 548..656 CDD:238001
CCP 664..718 CDD:153056 12/66 (18%)
CUB 721..828 CDD:238001 29/115 (25%)
CCP 834..891 CDD:153056 13/75 (17%)
CUB 895..1002 CDD:238001 27/121 (22%)
CCP 1010..1063 CDD:214478 7/57 (12%)
CUB 1067..1175 CDD:238001 25/117 (21%)
CCP 1182..1238 CDD:153056
CUB 1241..1348 CDD:238001
CCP 1354..1411 CDD:153056
CUB 1414..1522 CDD:238001
CCP 1528..1585 CDD:153056
CUB 1588..1695 CDD:238001
Sushi 1701..1758 CDD:278512
CUB 1762..1869 CDD:238001
CCP 1878..1936 CDD:153056
CUB 1939..2046 CDD:238001
CCP 2052..2107 CDD:153056
CUB 2111..2218 CDD:238001
CCP 2224..2280 CDD:153056
CUB 2283..2389 CDD:238001
CCP 2395..2453 CDD:153056
CUB 2460..2566 CDD:238001
CCP 2569..2628 CDD:153056
PHA02927 2627..2871 CDD:222943
Sushi 2632..2689 CDD:278512
CCP 2694..2755 CDD:153056
PHA02927 2756..2991 CDD:222943
CCP 2759..2812 CDD:153056
CCP 2817..2871 CDD:153056
CCP 2875..2929 CDD:153056
PHA02927 2928..3168 CDD:222943
CCP 2933..2991 CDD:153056
CCP 2995..3048 CDD:153056
CCP 3056..3110 CDD:153056
CCP 3114..3168 CDD:153056
PHA02927 3168..3407 CDD:222943
CCP 3173..3229 CDD:153056
Sushi 3233..3286 CDD:278512
CCP 3291..3345 CDD:153056
CCP 3352..3407 CDD:153056
CCP 3411..3467 CDD:153056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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