DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34402 and LOC105946018

DIOPT Version :9

Sequence 1:NP_001097756.1 Gene:CG34402 / 41513 FlyBaseID:FBgn0085431 Length:695 Species:Drosophila melanogaster
Sequence 2:XP_031756313.1 Gene:LOC105946018 / 105946018 -ID:- Length:583 Species:Xenopus tropicalis


Alignment Length:228 Identity:56/228 - (24%)
Similarity:90/228 - (39%) Gaps:39/228 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 QAP-ERVQIRFHDFNVPTEHENSTGCQPGDALHVVTELRGRYETQELL----CGAFLPKPLMSSG 482
            ||| :.|.:.|..||:.:        .|..|...:....||..|..||    ||:.....|::|.
 Frog   380 QAPSDLVTLTFAAFNLQS--------APNCASDYIRVYDGRTRTSPLLLDRTCGSKRVPALIASS 436

  Fly   483 QQLHLQFVGKYPPTMTNKVQYYGFRAEYRFLTNFGIMSGIQKEGCSFVYNSSERISGLFHSPNFP 547
            ..:.::|||      :..::..||.|.|..:          |.|.:: |..|..|:    ||.:|
 Frog   437 SMMLVEFVG------SKNLKATGFSASY
STV----------KCGGTY-YTPSRNIT----SPGYP 480

  Fly   548 GYYLENVVCNYYFYGASDERVVLHFTYFDIEGIGSCDHQTASDYIEFSNFMSTDRKFSR-YCGKL 611
            ..|..|..|:|.....:..:|.|....|..:.    .|..::||:...:..||:....: :||.|
 Frog   481 KNYPPNSNCSYIITAPASHKVSLSKISFYTQN----SHTCSNDYLSVYDGTSTNAPLLKTFCGPL 541

  Fly   612 PDFEMRSDGRFFRVTLHSNDRFVAIGFRALYTF 644
            ......|.|:...:...|:....|.||...|:|
 Frog   542 FTLSATSTGQNMFLRFISDQTEQAPGFVLTYSF 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34402NP_001097756.1 CUB 195..318 CDD:238001
CUB <414..512 CDD:238001 25/93 (27%)
CUB 527..644 CDD:238001 28/117 (24%)
LOC105946018XP_031756313.1 C2 92..>113 CDD:417471
ZnMc 164..346 CDD:412141
CUB 349..458 CDD:395345 24/91 (26%)
CUB 463..574 CDD:238001 29/119 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.