DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG34402 and gprin3

DIOPT Version :9

Sequence 1:	NP_001097756.1	Gene:	CG34402 / 41513	FlyBaseID:	FBgn0085431	Length:	695	Species:	Drosophila melanogaster
Sequence 2:	XP_017951795.1	Gene:	gprin3 / 101733019	XenbaseID:	XB-GENE-6468967	Length:	725	Species:	Xenopus tropicalis

Alignment Length:	426	Identity:	88/426 - (20%)
Similarity:	139/426 - (32%)	Gaps:	143/426 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly   261 LDALTLFDAESAHMNSVIDVICSSR---------PTRRLVSTGPDLLLEFNASSNRTAKGFRGK- 315
            ||..|..|.:|...|:::..:.|:.         ..:.||.:.||..|: :...|:.|......
Frog   126 LDEKTANDEKSVKDNTLVAPLVSAEAGMQVSSDFKNKPLVESEPDKGLD-SLLQNKEADPSLPSL 189

  Fly   316 --YKFVSNDLGVPNASVPPPAVLEAASVVVKQ-------------EKLQQEQASAAKENSLMSDV 365
              :|..|.:.|..|||    .::|:..|:..:             .||..|:....|||   .:|
Frog   190 PTHKTESINSGTQNAS----TIIESEGVITAEGESTKDSITSNECHKLSFEKDKIKKEN---EEV 247

  Fly   366 ELSKPGRS-FEQCK----------QTFDSRV-------NKSGIFDSNQLLLA---------KHAL 403
            |...|..| |::..          .|.|:.|       ||| :..|..:|.|         |...
Frog   248 ETDPPLPSRFKEMGTMTSFSLENWTTQDAEVQAVANVENKS-VSTSPSILAAFLKANSPALKERQ 311

  Fly   404 GGVVI------GGSRVLQCRYEFEA-------------QAPERVQ---IRFH-----DFNVPTEH 441
            ..|.|      |.|::.:..:..:|             |||:.:.   ::.|     |...||..
Frog   312 EQVCIIYQGNPGASQLDRANFALQAQLSQNQLAPKLCFQAPDALSSQPLQMHTKSPPDLARPTFQ 376

  Fly   442 ENSTGCQPGDALHVVTELRGRYETQELLCGAFLPKPLMSSGQQLHLQFVGKYPPTMTNKVQYYGF 506
            ....| :....|:     |...|.|. ||...:|:..|:|..           |.:.|....|..
Frog   377 HTEIG-RNSQILY-----RNEIEGQG-LCFREMPQMQMASPS-----------PILMNVKPVYQI 423

  Fly   507 RAEYRFLTNFGIMSGIQKEGCSFVYNSSE---RISGLFHSP-NFPGYYLENVVCNYYFYGASDER 567
            ..|                      ||::   |...::..| :|....:.|....::..|.  |.
Frog   424 NIE----------------------NSAQPKPRTMDMYSEPSHFRAPEINNKSRLHHLSGV--EN 464

  Fly   568 VVLHFTYFDIEGIGSCDHQTASDYIEFSNFMSTDRK 603
            :.||....|       :.||  |.:......|||||
Frog   465 IQLHNIRLD-------NDQT--DTLSIPGDDSTDRK 491

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG34402	NP_001097756.1	CUB	195..318	CDD:238001	14/68 (21%)
		CUB	<414..512	CDD:238001	22/118 (19%)
		CUB	527..644	CDD:238001	19/81 (23%)
gprin3	XP_017951795.1	GRIN_C	600..720	CDD:373668
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910