DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34402 and pcolce2a

DIOPT Version :9

Sequence 1:NP_001097756.1 Gene:CG34402 / 41513 FlyBaseID:FBgn0085431 Length:695 Species:Drosophila melanogaster
Sequence 2:XP_009295891.1 Gene:pcolce2a / 100002838 ZFINID:ZDB-GENE-070705-25 Length:415 Species:Danio rerio


Alignment Length:496 Identity:87/496 - (17%)
Similarity:132/496 - (26%) Gaps:230/496 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 TDGRLVPHSFCDFYFFASLSGEEANMG-QGYFHSPQFPAHYPAHIKCAYKFIGRPDTHVEILFEE 248
            |.||..|...|.    .:.:|:...:| |||      ||.||.:.||.::........|.:||..
Zfish    19 TQGRRRPAFTCG----GNFTGDTGMIGSQGY------PAVYPPNNKCVWRITVPQGRLVSLLFRV 73

  Fly   249 LQLPPVVSGGCQLDALTLFDAESAHMNSV-IDVICSSRPTRRLVSTGPDLLLEFNASSNRTAKGF 312
            |.|..  ...|:.|.:.::|   .|:|.. :...|.:...|.||:.|..:.:...:.:|....||
Zfish    74 LDLES--DSLCRYDFVDVYD---GHINGQRLGRFCGTAKPRALVTNGNKMQVVMVSDANTAGSGF 133

  Fly   313 RGKYKFVSNDLGVPNASVPPPAVLEAASVVVKQEKLQQEQASAAKENSLMSDVELSKPGRSFEQC 377
            ...|                                     ||.:.|                  
Zfish   134 LAVY-------------------------------------SAIRPN------------------ 143

  Fly   378 KQTFDSRVNKSGIFDSNQLLLAKHALGGVVIGGSRVLQCRYEFEAQAPERVQIRFHDFNVPTEHE 442
                                                            |||.             
Zfish   144 ------------------------------------------------ERVD------------- 147

  Fly   443 NSTGCQPGDALHVVTELRGRYETQELLCGAFLPKPLMSSGQQLHLQFVGKYPPTMTNKVQYYGFR 507
                               ||      ||..|.||                              
Zfish   148 -------------------RY------CGGLLDKP------------------------------ 157

  Fly   508 AEYRFLTNFGIMSGIQKEGCSFVYNSSERISGLFHSPNFPGY-YLENVVCNYYFYGASDERVVLH 571
                                          ||...:||:|.. |...|.|:::.....|:.:.|.
Zfish   158 ------------------------------SGTIKTPNWPDKDYPPGVTCSWHIVAPLDQIIELK 192

  Fly   572 FTYFDIEGIGSCDHQTASDYIEFSNFMSTD--RKFSRYCGKLPDFEMRSDGRFFRVTLHSNDRFV 634
            |..||:|...:|.:    |::...|...|:  ||..::||..|...:.|||....:|..|:....
Zfish   193 FEKFDVERDSNCRY----DHVAVFNGGETNETRKIGKFCGDSPPMPIHSDGHHLLITFLSDLSLT 253

  Fly   635 AIGFRALYTFETVSVNNSITDLRDNASMQSFVSTASTQPVA 675
            |.||...|.|:..|.:.:...|....::     :.||.|.|
Zfish   254 ADGFIGHYRFKWRSPSTASAPLTPAGTI-----SPSTPPAA 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34402NP_001097756.1 CUB 195..318 CDD:238001 31/124 (25%)
CUB <414..512 CDD:238001 10/97 (10%)
CUB 527..644 CDD:238001 32/119 (27%)
pcolce2aXP_009295891.1 CUB 29..139 CDD:238001 31/161 (19%)
CUB 150..263 CDD:238001 37/176 (21%)
NTR_PCOLCE 292..415 CDD:239631
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I5088
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4379
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.960

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