DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD11 and VARS1

DIOPT Version :10

Sequence 1:NP_001138040.1 Gene:GstD11 / 41512 FlyBaseID:FBgn0038029 Length:243 Species:Drosophila melanogaster
Sequence 2:XP_005249419.1 Gene:VARS1 / 7407 HGNCID:12651 Length:1265 Species:Homo sapiens


Alignment Length:226 Identity:49/226 - (21%)
Similarity:76/226 - (33%) Gaps:80/226 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YLPPSP---PCRSILLLAKMLDIDFELKIVNILEGEQLKPDFVAMNPQHCV---PT--------- 78
            |:.|.|   |....|:.|:..:..         ||    |.:...:|:.|:   ||         
Human     5 YVSPHPDAFPSLRALIAARYGEAG---------EG----PGWGGAHPRICLQPPPTSRTPFPPPR 56

  Fly    79 -----MNDEGLVLWESRAILSYL-VAAYGKSDQLYPTDIRVRALVDQRLQF------------DL 125
                 ....||.:|.:.|:...| .|..|.     |...|...||.|.:.:            .|
Human    57 LPALEQGPGGLWVWGATAVAQLLWPAGLGG-----PGGSRAAVLVQQWVSYADTELIPAACGATL 116

  Fly   126 GTLYMRLTDYYFPTMFIGA------PLDEGKRAKLAEAVGWLNTILEGRQFSAADHFTIADLTLL 184
            ..|.:| :....|...:||      ||:|..|         |:|.|.|      :..|:|||..:
Human   117 PALGLR-SSAQDPQAVLGALGRALSPLEEWLR---------LHTYLAG------EAPTLADLAAV 165

  Fly   185 VTVSQLEAFEFELRP-----YKHIRQWLDRC 210
            ..:  |..|.:.|.|     :.::.:|...|
Human   166 TAL--LLPFRYVLDPPARRIWNNVTRWFVTC 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD11NP_001138040.1 GST_N_Delta_Epsilon 25..98 CDD:239343 18/89 (20%)
GST_C_Delta_Epsilon 112..231 CDD:198287 28/122 (23%)
VARS1XP_005249419.1 GST_C_ValRS_N 92..213 CDD:198327 27/121 (22%)
PTZ00419 283..1265 CDD:240411
Blue background indicates that the domain is not in the aligned region.

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