DRSC/TRiP Functional Genomics Resources

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Protein Alignment STX19 and Syx17

DIOPT Version :10

Sequence 1:NP_001001850.1 Gene:STX19 / 415117 HGNCID:19300 Length:294 Species:Homo sapiens
Sequence 2:NP_001261414.1 Gene:Syx17 / 38541 FlyBaseID:FBgn0035540 Length:346 Species:Drosophila melanogaster


Alignment Length:226 Identity:54/226 - (23%)
Similarity:92/226 - (40%) Gaps:33/226 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    67 NVQKFGQQQKSLVASMRRFSLLK-RESTITKEI------KIQAEYINRSLNDLVKEVKKSEVENG 124
            ::|:|..     ||.....|||| ..|.|.|.:      ||:.|.:|..  .::|::|...:|  
  Fly    15 SIQRFQD-----VAVPHHLSLLKNHRSNIEKSLALGDWQKIKKEELNAM--RVIKQIKNLLLE-- 70

Human   125 PSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSEEDVNDMLHQG 189
                :..:.:.........|..:|....||..|..   |.|...||:.....:|.:..:|:.:|.
  Fly    71 ----MDALREKVREEDLERFDDLMKPGRDTAFAGM---KEFAELQLKSPTSTLSSQYDDDLDNQP 128

Human   190 KWEVFNESLLTEINITKAQLS------EIEQRH---KELVNLENQIKDLRDLFIQISLLVEEQGE 245
            : ||...||....::.:.||:      ::.||.   .::.||:.:|.||..:|..:..|..||..
  Fly   129 Q-EVDMNSLPAHRHMPQLQLNFQLEEHQLAQRQACLDQMENLQQEIYDLHGMFQGMRQLTAEQSV 192

Human   246 SINNIEMTVNSTKEYVNNTKEKFGLAVKYKK 276
            ::..|........|.|...:.....|:.|||
  Fly   193 AVEKIADNAEEALENVQQGELNLRRALTYKK 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STX19NP_001001850.1 Syntaxin 49..244 CDD:459942 46/192 (24%)
SNARE 212..278 CDD:473982 18/68 (26%)
Syx17NP_001261414.1 SNARE_syntaxin17 156..217 CDD:277199 14/60 (23%)

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