DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD1 and VARS1

DIOPT Version :10

Sequence 1:NP_524326.1 Gene:GstD1 / 41503 FlyBaseID:FBgn0001149 Length:209 Species:Drosophila melanogaster
Sequence 2:XP_005249419.1 Gene:VARS1 / 7407 HGNCID:12651 Length:1265 Species:Homo sapiens


Alignment Length:97 Identity:26/97 - (26%)
Similarity:42/97 - (43%) Gaps:17/97 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 LYQSFANYYYPQVF-----AKAPA--------DPEA-FKKIEAAFEFLNTFLEGQDYAAGDSLTV 155
            |.|.:.:|...::.     |..||        ||:| ...:..|...|..:|....|.||::.|:
Human    95 LVQQWVSYADTELIPAACGATLPALGLRSSAQDPQAVLGALGRALSPLEEWLRLHTYLAGEAPTL 159

  Fly   156 ADIALV-ATVSTFEVAKFEISK--YANVNRWY 184
            ||:|.| |.:..|.......::  :.||.||:
Human   160 ADLAAVTALLLPFRYVLDPPARRIWNNVTRWF 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD1NP_524326.1 GST_N_Delta_Epsilon 2..75 CDD:239343
GST_C_Delta_Epsilon 89..205 CDD:198287 26/97 (27%)
VARS1XP_005249419.1 GST_C_ValRS_N 92..213 CDD:198327 26/97 (27%)
PTZ00419 283..1265 CDD:240411
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.