back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstD1 and Gstz1

DIOPT Version :9

Sequence 1:	NP_001034042.1	Gene:	GstD1 / 41503	FlyBaseID:	FBgn0001149	Length:	209	Species:	Drosophila melanogaster
Sequence 2:	NP_001102915.1	Gene:	Gstz1 / 681913	RGDID:	1589363	Length:	216	Species:	Rattus norvegicus

Alignment Length:	177	Identity:	49/177 - (27%)
Similarity:	81/177 - (45%)	Gaps:	9/177 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 SPCRSVIMTAKAV-GVELNKKLLNL--QAGEHLKPEFLKINPQHTIPTLVDNGFALWESRAIQVY 72
            |.|...:..|.|: |::.....:||  ..|:....||..:||...:|.|..:|..:.:|.||..|
  Rat    14 SSCSWRVRIALALKGIDYEIVPINLIKDGGQQFSEEFQTLNPMKQVPALKIDGITIGQSLAILEY 78

  Fly    73 LVEKYGKTDSLYPKCPKKRAVINQRLYFDM-GTLYQSFANYYYPQVFAKAPADPEAFKKIEAAFE 136
            | |:......|.|:.|:|||::  |:..|: .:..|...|....:...:....|.|.|.|.:.|.
  Rat    79 L-EETRPIPRLLPQDPQKRAIV--RMISDLIASGIQPLQNLSVLKQVGQENQMPWAQKAITSGFN 140

  Fly   137 FLNTFLEGQ--DYAAGDSLTVADIALVATVSTFEVAKFEISKYANVN 181
            .|...|:..  .|..||.:::||:.|...|:..|..|.::|.|..::
  Rat   141 ALEKILQSTAGKYCVGDEVSMADVCLAPQVANAERFKVDLSPYPTIS 187

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.