DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD1 and eEF1gamma

DIOPT Version :9

Sequence 1:NP_001034042.1 Gene:GstD1 / 41503 FlyBaseID:FBgn0001149 Length:209 Species:Drosophila melanogaster
Sequence 2:NP_001189308.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster


Alignment Length:197 Identity:51/197 - (25%)
Similarity:87/197 - (44%) Gaps:18/197 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YYLPGSSPCRSVIMTAKAVGVELNKKLLNLQAGEHLK-PEFLKINPQHTIPTL-VDNGFALWESR 67
            |..|.:......::.|:..|.:: |...|.:.||..| .||||..|...:|.. ...|..|.||.
  Fly     7 YTYPENFRAYKALIAAQYSGAQV-KVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQYLSESN 70

  Fly    68 AIQVYLVEKYGKTDSLYPKCPKKRAVINQRLYFDMGTLYQSFANYYYPQV-FAKAPADPEAFKKI 131
            ||...|..:..:..    |||..:|.:.|.:.|....:..:...:.:|.: ......:..|.::.
  Fly    71 AIAYLLANEQLRGG----KCPFVQAQVQQWISFADNEIVPASCAWVFPLLGILPQQKNSTAKQEA 131

  Fly   132 EAAFEFLNTFLEGQDYAAGDSLTVADIALVATVSTFEVAKFEI-----SKYANVNRWYE---NAK 188
            ||..:.||..|:...:.||:.:|:|||.:.:  |...:.::.:     |.:.|||||:.   |.|
  Fly   132 EAVLQQLNQKLQDATFLAGERITLADIVVFS--SLLHLYEYVLEPSVRSAFGNVNRWFVTILNQK 194

  Fly   189 KV 190
            :|
  Fly   195 QV 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD1NP_001034042.1 GST_N_Delta_Epsilon 2..75 CDD:239343 22/71 (31%)
GstA 4..185 CDD:223698 48/187 (26%)
GST_C_Delta_Epsilon 89..205 CDD:198287 26/111 (23%)
eEF1gammaNP_001189308.1 GST_N_EF1Bgamma 4..79 CDD:239342 22/72 (31%)
GstA 5..187 CDD:223698 47/186 (25%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 26/109 (24%)
EF1G 271..376 CDD:279041
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459937
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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