DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD1 and Mars1

DIOPT Version :9

Sequence 1:NP_001034042.1 Gene:GstD1 / 41503 FlyBaseID:FBgn0001149 Length:209 Species:Drosophila melanogaster
Sequence 2:XP_006241513.1 Gene:Mars1 / 299851 RGDID:1305321 Length:910 Species:Rattus norvegicus


Alignment Length:74 Identity:21/74 - (28%)
Similarity:29/74 - (39%) Gaps:19/74 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VDFYYLPGSS--PCRSVIMTAKAVGVELNKKLL-NLQAGEHLKPEFLKINPQHTIPTLVDNGFAL 63
            ||.|......  |...::....|:|.|.|..|: ||.|.|:|..|              |..|: 
  Rat   548 VDLYQFMAKDNVPFHGLVFPCSALGAEDNYTLVKNLIATEYLNYE--------------DGKFS- 597

  Fly    64 WESRAIQVY 72
             :||.|.|:
  Rat   598 -KSRGIGVF 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD1NP_001034042.1 GST_N_Delta_Epsilon 2..75 CDD:239343 21/74 (28%)
GstA 4..185 CDD:223698 19/72 (26%)
GST_C_Delta_Epsilon 89..205 CDD:198287
Mars1XP_006241513.1 Thioredoxin_like 1..68 CDD:294274
GstA <47..189 CDD:223698
GST_C_MetRS_N 77..179 CDD:198340
PRK12268 266..821 CDD:237029 21/74 (28%)
MetRS_core 267..635 CDD:173907 21/74 (28%)
Anticodon_Ia_Met 644..773 CDD:153411
MetRS_RNA 855..899 CDD:238475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.