DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstD1 and Eef1g

DIOPT Version :9

Sequence 1:	NP_001034042.1	Gene:	GstD1 / 41503	FlyBaseID:	FBgn0001149	Length:	209	Species:	Drosophila melanogaster
Sequence 2:	NP_001004223.1	Gene:	Eef1g / 293725	RGDID:	1302939	Length:	437	Species:	Rattus norvegicus

Alignment Length:	194	Identity:	45/194 - (23%)
Similarity:	81/194 - (41%)	Gaps:	23/194 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 YYLPGSSPCRSVIMTAKAVGVELNKKLLNLQAGEHL-------KPEFLKINPQHTIPTLV-DNGF 61
            |..|.:......::.|:..|.::..    |.|..|.       .||||:..|...:|... |:||
  Rat     7 YTYPENWRAFKALIAAQYSGAQIRV----LSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGF 67

  Fly    62 ALWESRAIQVYLVEKYGKTDSLYPKCPKKRAVINQRLYFDMGTLYQSFANYYYPQ---VFAKAPA 123
            .::||.||..|:     ..:.|....|:..|.:.|.:.|....:....:.:.:|.   :.....|
  Rat    68 CVFESNAIAYYV-----SNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQA 127

  Fly   124 DPEAFKKIEAAFEFLNTFLEGQDYAAGDSLTVADIALVATVSTFEVAKFEIS---KYANVNRWY 184
            ...|.::::.....|:|.|:.:.:..|:.:|:|||.:|.|:........|.|   .:.|.|||:
  Rat   128 TENAKEEVKRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWF 191

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
GstD1	NP_001034042.1	GST_N_Delta_Epsilon	2..75	CDD:239343	21/77 (27%)
		GstA	4..185	CDD:223698	45/194 (23%)
		GST_C_Delta_Epsilon	89..205	CDD:198287	22/102 (22%)
Eef1g	NP_001004223.1	GST_N_EF1Bgamma	4..82	CDD:239342	21/83 (25%)
		maiA	5..187	CDD:273527	41/188 (22%)
		GST_C_EF1Bgamma_like	91..213	CDD:198290	22/101 (22%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	221..268
		EF1G	275..381	CDD:279041
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0625
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810