DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD1 and Vars

DIOPT Version :9

Sequence 1:NP_001034042.1 Gene:GstD1 / 41503 FlyBaseID:FBgn0001149 Length:209 Species:Drosophila melanogaster
Sequence 2:NP_035820.3 Gene:Vars / 22321 MGIID:90675 Length:1263 Species:Mus musculus


Alignment Length:107 Identity:30/107 - (28%)
Similarity:43/107 - (40%) Gaps:26/107 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 PQVFAKAPA-DPE-AFKKIEAAFEFLNTFLEGQDYAAGDSLTVADIALV-ATVSTFEVAKFEISK 176
            |.:..:.|. ||: |...:..|...|..:|....|.|||:.|:||:|.| |.:..|.......::
Mouse   117 PALGLRGPGQDPQAALGALGKALNPLEDWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLDPSAR 181

  Fly   177 --YANVNRW-------------------YENAKKVT--PGWE 195
              :.||.||                   |..|:.||  ||.|
Mouse   182 RIWGNVTRWFNTCVRQPEFRAVLGEVALYSGARSVTQQPGSE 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD1NP_001034042.1 GST_N_Delta_Epsilon 2..75 CDD:239343
GstA 4..185 CDD:223698 23/93 (25%)
GST_C_Delta_Epsilon 89..205 CDD:198287 30/107 (28%)
VarsNP_035820.3 GST_C_family 92..213 CDD:383119 24/95 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..294 3/6 (50%)
PTZ00419 281..1263 CDD:240411
'HIGH' region 343..353
'KMSKS' region 861..865
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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