DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD1 and Gsta1

DIOPT Version :9

Sequence 1:NP_001034042.1 Gene:GstD1 / 41503 FlyBaseID:FBgn0001149 Length:209 Species:Drosophila melanogaster
Sequence 2:NP_032207.3 Gene:Gsta1 / 14857 MGIID:1095417 Length:223 Species:Mus musculus


Alignment Length:226 Identity:56/226 - (24%)
Similarity:87/226 - (38%) Gaps:59/226 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVDFYYLPGSSPCRSVIMTAKAVGVELNKKLLNLQAGEHLKPEFLKINPQ---HTIPTLVDNGFA 62
            ::.::...|...|...::.  |.|||..:|.  :|:.|.|  |.||.:..   ..:|.:..:|..
Mouse     6 VLHYFNARGRMECIRWLLA--AAGVEFEEKF--IQSPEDL--EKLKKDGNLMFDQVPMVEIDGMK 64

  Fly    63 LWESRAIQVYLVEKYGKTDSLYPKCPKKRAVINQRLYFD--------MGTLYQSFANYYYPQVFA 119
            |.::|||..|:..||    .||.|..|:||:|:  :|.:        :|.|             .
Mouse    65 LAQTRAILNYIATKY----DLYGKDMKERALID--MYSEGILDLTEMIGQL-------------V 110

  Fly   120 KAPADPEAFKKIEAAFEFLNTFL---------EGQDYAAGDSLTVADIALVAT---VSTFEVA-- 170
            ..|.|....|...|.....|.:|         .||||..|:.||..||.|:..   |..|:.:  
Mouse   111 LCPPDQREAKTALAKDRTKNRYLPAFEKVLKSHGQDYLVGNRLTRVDIHLLEVLLYVEEFDASLL 175

  Fly   171 ---------KFEISKYANVNRWYENAKKVTP 192
                     |..||...||.::.:...:..|
Mouse   176 TPFPLLKAFKSRISSLPNVKKFLQPGSQRKP 206

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstD1NP_001034042.1 GST_N_Delta_Epsilon 2..75 CDD:239343 20/75 (27%)
GstA 4..185 CDD:223698 55/214 (26%)
GST_C_Delta_Epsilon 89..205 CDD:198287 31/135 (23%)
Gsta1NP_032207.3 GST_N_Alpha 4..82 CDD:239375 22/85 (26%)