DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD1 and Gdap1

DIOPT Version :9

Sequence 1:NP_001034042.1 Gene:GstD1 / 41503 FlyBaseID:FBgn0001149 Length:209 Species:Drosophila melanogaster
Sequence 2:NP_034397.1 Gene:Gdap1 / 14545 MGIID:1338002 Length:358 Species:Mus musculus


Alignment Length:259 Identity:51/259 - (19%)
Similarity:88/259 - (33%) Gaps:100/259 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VIMTAKAVGVELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVDNGFALWESRAIQVYLVEKYGKT 80
            :::..||:..|.:.  ::|...||.:|.|:::|....:|.||.....:.|:..|..||.:.:   
Mouse    42 LVIAEKALKCEEHD--VSLPLSEHNEPWFMRLNSAGEVPVLVHGENIICEATQIIDYLEQTF--- 101

  Fly    81 DSLYPKCPKKRAVINQRLYFDMGTLYQSFANYY------------------YPQ--VFAKAPA-- 123
              |..:.|        ||..|.|::|.....:|                  :|:  |.:..||  
Mouse   102 --LDERTP--------RLMPDEGSMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYA 156

  Fly   124 ---------------------DP---EAF--------------------KKI----EAAFEFLNT 140
                                 :|   ||:                    |||    |...:.:.|
Mouse   157 TTRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVET 221

  Fly   141 FLE----------GQDYAAGDSLTVADIALVATVSTFEVAKFE-----ISKYANVNRWYENAKK 189
            .|:          .|.:..|:|.|:||::|..|:...:...|.     ..|..|:..:||...|
Mouse   222 ELQRRNEETPEEGNQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGHGKRPNLETYYERVLK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD1NP_001034042.1 GST_N_Delta_Epsilon 2..75 CDD:239343 16/58 (28%)
GstA 4..185 CDD:223698 48/253 (19%)
GST_C_Delta_Epsilon 89..205 CDD:198287 33/186 (18%)
Gdap1NP_034397.1 GST_N_GDAP1 26..98 CDD:239350 15/57 (26%)
GST_C_GDAP1 179..289 CDD:198336 23/107 (21%)
Required for mitochondrial localization. /evidence=ECO:0000250 320..358
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844780
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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