DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD9 and Gdap1

DIOPT Version :9

Sequence 1:NP_001287303.1 Gene:GstD9 / 41502 FlyBaseID:FBgn0038020 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001101367.1 Gene:Gdap1 / 312890 RGDID:1309005 Length:358 Species:Rattus norvegicus


Alignment Length:267 Identity:52/267 - (19%)
Similarity:86/267 - (32%) Gaps:84/267 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LDFYYMLYSAPCRSILMTARALGLELNKKQVDLDAGEHLKPEFVKINPQHTIPTLVDDGFAIWES 66
            |..|:..:|...:.:.:......|:..:..|.|...||.:|.|:::|....:|.|:.....|.|:
  Rat    26 LILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENIICEA 90

  Fly    67 RAILIYLAEKY----------DKDGSLYPKDPQQRAVINQRLFFDLSTLYQSYVY--YYYPQLFE 119
            ..|:.||.:.:          |:....||:....|.:::       |....:|.:  ..:|:|..
  Rat    91 TQIIDYLEQTFLDERTPRLMPDEGSMYYPRVQHYRELLD-------SLPMDAYTHGCILHPELTV 148

  Fly   120 DVKKPA-------------------------------------------DPDN---LKKIDD--- 135
            |...||                                           |.||   ||||.|   
  Rat   149 DSMIPAYATTRIRGQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELE 213

  Fly   136 -AFAMFNTLLK----------GQQYAALNKLTLADFALLATVST-----FEISEYDFGKYPEVVR 184
             ......|.|:          .|.:......||||.:|..|:..     |....:..||.|.:..
  Rat   214 KVLDQVETELQRRNEETPDEGNQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGHGKRPNLES 278

  Fly   185 WYDNAKK 191
            :|:...|
  Rat   279 YYERVLK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD9NP_001287303.1 GST_N_Delta_Epsilon 2..75 CDD:239343 18/72 (25%)
GstA 4..187 CDD:223698 49/259 (19%)
GST_C_Delta_Epsilon 89..207 CDD:198287 31/170 (18%)
Gdap1NP_001101367.1 GstA 26..292 CDD:223698 52/267 (19%)
GST_N_GDAP1 26..98 CDD:239350 17/71 (24%)
GST_C_GDAP1 179..289 CDD:198336 23/107 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348236
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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