DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17a1 and timm17b

DIOPT Version :9

Sequence 1:NP_001287301.1 Gene:Tim17a1 / 41500 FlyBaseID:FBgn0038018 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001072242.1 Gene:timm17b / 779691 XenbaseID:XB-GENE-6454019 Length:156 Species:Xenopus tropicalis


Alignment Length:136 Identity:78/136 - (57%)
Similarity:97/136 - (71%) Gaps:0/136 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSIAGSFA 66
            ||.|:|||.|||:|||.||.||.|||.:|:.:|||||||.|:..||.|.:..|::|.|.|.||||
 Frog     3 EYMREPCPWRIVDDCGGAFTMGIIGGGVFQAVKGFRNAPAGVAHRLRGSMSAVRIRAPQIGGSFA 67

  Fly    67 VWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLVLAMIEGAGAA 131
            |||..|||:||.||..|.:||.||||.|||.||.:||:|:|..||..|||:|.::||:|||.|..
 Frog    68 VWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLASRSGPLAMVGSALMGGILLALIEGVGIL 132

  Fly   132 VATINA 137
            :....|
 Frog   133 LTRYTA 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17a1NP_001287301.1 Tim17 2..138 CDD:295283 78/136 (57%)
timm17bNP_001072242.1 Tim17 1..146 CDD:321914 78/136 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001103
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X753
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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