DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17a1 and Timm23

DIOPT Version :9

Sequence 1:NP_001287301.1 Gene:Tim17a1 / 41500 FlyBaseID:FBgn0038018 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_062225.1 Gene:Timm23 / 54312 RGDID:3863 Length:209 Species:Rattus norvegicus


Alignment Length:113 Identity:28/113 - (24%)
Similarity:45/113 - (39%) Gaps:25/113 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TIG-----GSLFEFLKGFR-------NAPTGLQRRLYGGIDLVKMRT------PSIAGSFAVWGA 70
            |||     |:.|..|.|.|       :.|....|    .:.::.|.|      .:..||.|:..:
  Rat    79 TIGGCCMTGAAFGALNGLRLGLKETQSMPWSKPR----NVQILNMVTRQGALWANTLGSLALLYS 139

  Fly    71 TFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVG 118
            .|..:   :...|..||.:|::.:|..||.:.....|:|.:|...|.|
  Rat   140 AFGVI---IEKTRGAEDDFNTVAAGTMTGMLYKCTGGLRGIARGGLAG 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17a1NP_001287301.1 Tim17 2..138 CDD:295283 28/113 (25%)
Timm23NP_062225.1 3a0801s02tim23 46..191 CDD:130056 28/113 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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