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Protein Alignment Tim17a1 and Timm17b
DIOPT Version :9
Sequence 1: | NP_001287301.1 |
Gene: | Tim17a1 / 41500 |
FlyBaseID: | FBgn0038018 |
Length: | 222 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038955701.1 |
Gene: | Timm17b / 317374 |
RGDID: | 1561744 |
Length: | 199 |
Species: | Rattus norvegicus |
Alignment Length: | 163 |
Identity: | 78/163 - (47%) |
Similarity: | 98/163 - (60%) |
Gaps: | 27/163 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 EYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSIAGSFA 66
||.|:|||.|||:|||.||.||.|||.:|:.:|||||||.|::.|..|.|:.|::|.|.|.||||
Rat 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAVKGFRNAPVGIRHRFRGSINAVRIRAPQIGGSFA 67
Fly 67 VWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARN------------------------- 106
|||..|||:||.||..|.:||.||||.|||.||.:||||:
Rat 68 VWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSECFQPLTPVLALFCLPFLSCVSFCL 132
Fly 107 --GIRAMANSALVGCLVLAMIEGAGAAVATINA 137
|..||..||::|.::||:|||.|..:....|
Rat 133 PGGPLAMVGSAMMGGILLALIEGVGILLTRYTA 165
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Tim17a1 | NP_001287301.1 |
Tim17 |
2..138 |
CDD:295283 |
78/163 (48%) |
Timm17b | XP_038955701.1 |
Tim17 |
1..198 |
CDD:413300 |
78/163 (48%) |
Information from Original Tools:
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