DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17a1 and tim17

DIOPT Version :10

Sequence 1:NP_650180.1 Gene:Tim17a1 / 41500 FlyBaseID:FBgn0038018 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_593342.1 Gene:tim17 / 2543163 PomBaseID:SPAC3A12.16C Length:164 Species:Schizosaccharomyces pombe


Alignment Length:137 Identity:65/137 - (47%)
Similarity:88/137 - (64%) Gaps:4/137 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSIAGSFA 66
            ::.|.|||..|:.|.|.||.||||||:::..:||:||:|.|.:|  ...|...|.|.|.:.|:|.
pombe     5 DHTRDPCPYVILNDFGAAFSMGTIGGAIWHSIKGWRNSPPGEKR--ISAIAAAKTRAPVLGGNFG 67

  Fly    67 VWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGC-LVLAMIEGAGA 130
            |||..|||.|||:...|::||.||:|::|..|||.||.|.|.||..|.| :|| .:||:.||.|.
pombe    68 VWGGLFSTFDCAVKGVRRKEDPWNAIIAGFFTGGALAVRGGWRATRNGA-IGCACILAVFEGLGI 131

  Fly   131 AVATINA 137
            |:..:||
pombe   132 ALGRMNA 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17a1NP_650180.1 TIM22 2..138 CDD:470560 65/137 (47%)
tim17NP_593342.1 TIM22 3..162 CDD:470560 65/137 (47%)

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