DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17a1 and timm-23

DIOPT Version :9

Sequence 1:NP_001287301.1 Gene:Tim17a1 / 41500 FlyBaseID:FBgn0038018 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_492953.1 Gene:timm-23 / 173041 WormBaseID:WBGene00008857 Length:242 Species:Caenorhabditis elegans


Alignment Length:129 Identity:36/129 - (27%)
Similarity:58/129 - (44%) Gaps:22/129 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSI---AGSFAVWGA---TFSTV 75
            |.||.:|...|:|.|.:    |..|   |::.|...:.:|...::   :|.....||   .:|.:
 Worm   118 GGAFGVGCARGALGELM----NPET---RKMVGKPWMTRMVNATMKHGSGFAQPSGAIVFMYSAL 175

  Fly    76 DCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLVLAMIEGAGAAVATINAAD 139
            :..|...| .||..|...:||.||.|..:.:|::|....||||..:        ||..|:::.|
 Worm   176 EIGLRSVR-AEDELNGFGAGALTGAIYRSPHGLKASGVGALVGLGI--------AAAWTLSSTD 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17a1NP_001287301.1 Tim17 2..138 CDD:295283 35/126 (28%)
timm-23NP_492953.1 Tim17 109..226 CDD:280604 34/123 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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