DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ARSL and Sgsh

DIOPT Version :9

Sequence 1:NP_001269557.1 Gene:ARSL / 415 HGNCID:719 Length:614 Species:Homo sapiens
Sequence 2:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster


Alignment Length:644 Identity:140/644 - (21%)
Similarity:223/644 - (34%) Gaps:221/644 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    36 FRSWLPAMLAVLLSLAPSASSDISASRPNILLLMADDLGIGDIGCYGNNTMRTPNIDRLAEDGVK 100
            |..||.|              ..||...|:|||:|||.|. :.|.|.|...:|||:|.||:.|:.
  Fly     8 FTLWLIA--------------GCSAGPQNVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGLL 57

Human   101 LTQHISAASLCTPSRAAFLTGRYPVRSGMV----SSIGYRVLQWTGASGGLPT--NETTFAKILK 159
            .....::.|.|:|||:..|||:....|||.    ....:.||..||:   ||.  .:.:..:|| 
  Fly    58 FNNAFTSVSSCSPSRSQLLTGQAGHSSGMYGLHQGVHNFNVLPDTGS---LPNLIRDQSGGRIL- 118

Human   160 EKGYATGLIGKWHLGLNCESASDHCHHPLHHGFDHFYGMPFSLMGDCARWELSEKRVNLEQKLNF 224
                 :|:|||.|:|.......|.......|..:.. |...:.|.:.||..|.:.:   ::|..|
  Fly   119 -----SGIIGKKHVGAANNFRFDFEQTEEQHSINQI-GRNITRMKEYARQFLKQAK---DEKKPF 174

Human   225 LFQVLALVALTLVAG-----KLTHLIP-------------------VSWMPVI--WSALSAVLLL 263
            .          |:.|     :..|:.|                   ..|.|:.  |..|.....|
  Fly   175 F----------LMVGFHDPHRCGHITPQFGEFCERWGSGEEGMGSIPDWKPIYYDWRNLDVPAWL 229

Human   264 ASSYFVGALIVHADCFLMRNHTITEQPMCFQRTTPLILQEVASFLKRNKHGPFLLFVSFLHVHIP 328
            ..                               |.::.||:|:                      
  Fly   230 PD-------------------------------TDVVRQELAA---------------------- 241

Human   329 LITMENFLGKSLHGLYGDNVEEMDWMVGRILDTLDVEGLSNSTLIYFTSDHGGSLENQLGNTQYG 393
                 .::          .:..:|..||.:|..|:..|:::.||:.:|||:|....        |
  Fly   242 -----QYM----------TISRLDQGVGLMLKELEAAGVADQTLVIYTSDNGPPFP--------G 283

Human   394 GWNGIYKGGKGMGGWEGGIRVPGIFRWPG------VLPAGRVIGEPTSLMDVFPTVVRLAGGEVP 452
            |...:|         |.|||.|.|...|.      ...|..|     ||:|::|:|:.......|
  Fly   284 GRTNLY---------EHGIRSPLIISSPNKEDRHHEATAAMV-----SLLDIYPSVMDALQIPRP 334

Human   453 QDRVIDGQDLLPLL------------LGTAQHSDHEFLMHYCERFLHAARWHQRDRGTMW----- 500
            .|..|.|:.:||:|            .|:  ||.||..|.|..|.:...|:........|     
  Fly   335 NDTKIVGRSILPVLREEPPIKESDSVFGS--HSYHEVTMAYPMRMVRNRRYKLIHNINYWADFPI 397

Human   501 -KVHFVTPVFQPEGAGACYGRKVCPCFGEKVVHHDPP--LLFDLSRDPSETHILTPASEPVFYQV 562
             :..:.:|.|| :...|...::..|.:...:.::..|  .|:|:..||.|...|  |.:..:...
  Fly   398 DQDFYTSPTFQ-QILNATLRKQTLPWYRSLLQYYQRPEWELYDIKTDPLERFNL--ADKAKYNGT 459

Human   563 MERVQQAVWEHQ-RTLSPVPLQLDRLGNIWRPWLQPCCGPF------------PLCWCL 608
            ::::::.:::.| .|..|           ||      |.|.            |:|..|
  Fly   460 LKQLREQLFDWQVATKDP-----------WR------CAPHAVLQEQGVYKDQPVCLTL 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARSLNP_001269557.1 ALP_like 62..585 CDD:355016 127/581 (22%)
SgshNP_650760.1 AslA 17..476 CDD:225661 128/577 (22%)
SGSH 22..471 CDD:293751 124/567 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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