DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MBD-R2 and CTI6

DIOPT Version :9

Sequence 1:NP_731688.2 Gene:MBD-R2 / 41498 FlyBaseID:FBgn0038016 Length:1169 Species:Drosophila melanogaster
Sequence 2:NP_015144.1 Gene:CTI6 / 855920 SGDID:S000006102 Length:506 Species:Saccharomyces cerevisiae


Alignment Length:394 Identity:86/394 - (21%)
Similarity:139/394 - (35%) Gaps:119/394 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   868 DSVSTPSSNDQTDINAALAPPPAETLSKAPQYIKENGELIRIVRMRQEE-IINCICEYGEED--- 928
            |.:||.|:...|   ||:.....|:: |......|.||    ..:.:|| ...|||  ||.|   
Yeast    30 DIISTTSTATTT---AAIGSVQEESV-KQEDVPMEGGE----GEVEEEEGETRCIC--GELDTPD 84

  Fly   929 --GLMIQCELCLCWQHGACNGIVKEADVPDKYVCYICR-------NPQRGRDSMRFKHDQDWLFE 984
              |..||||.|..||||.|..|.:: :.||||.|..||       ....|.....:|..|:...:
Yeast    85 DSGFFIQCEQCSSWQHGYCVSITQD-NAPDKYWCEQCRPELHQLFTTDTGEARSIYKPVQEKRRQ 148

  Fly   985 GK-----LPVAAYHTAN-----PQATKQFE---------------------LLKRSHTLTG---- 1014
            .:     ...:..|.||     |:.|...:                     |.|..:|.:.    
Yeast   149 SRRKARSAAASKSHAANEAEKSPRNTSNTDDNVDDIGDEEDEVEDEASAVALAKDGNTRSSRRRR 213

  Fly  1015 ---------------------NLLDAKRS---------MHSLLVK-INIARNRCH---PKLY--- 1042
                                 .|||.||:         ...:|.| :..:|...|   |:.|   
Yeast   214 RNSMDDASTDQYSLDPGDSDKKLLDRKRATFMAREEKQYQRMLEKALKESRRTSHQEDPESYEND 278

  Fly  1043 --LWAKKWDEDNLDSTALTPVKRAKLEAPDLPNVPQPEAAIDPEECQYRLIEHIKVQQSLVLDRL 1105
              ::  :.|.||.:.|       .:|:...:....:|::..:.:     :.|.::..:...:::.
Yeast   279 ADIY--QGDTDNHNGT-------TRLQTDVMLTEGKPDSVTNDD-----MKESLRPSKEQSMEKT 329

  Fly  1106 NDIEAEMDELEKEDTLDDLKDADISTTKEALATFIKELETMKRLA------KLNQVANMKQTLRD 1164
            ||:|.|..: |||.:....:|.:.:.......|.|...|...|.|      ::::.|......|.
Yeast   330 NDVEKEASQ-EKESSTGSAQDTEKTDEPILPLTSISSSEDDSRKASSRGSKRVSKPARKGNRTRR 393

  Fly  1165 SATS 1168
            |.||
Yeast   394 SNTS 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MBD-R2NP_731688.2 THAP 4..86 CDD:283206
TUDOR 292..329 CDD:119391
MeCP2_MBD 449..522 CDD:238690
PHD_SF 919..963 CDD:304600 23/48 (48%)
CTI6NP_015144.1 PHD_MLL5 74..120 CDD:277025 23/48 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1844
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001785
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.