| Sequence 1: | NP_731688.2 | Gene: | MBD-R2 / 41498 | FlyBaseID: | FBgn0038016 | Length: | 1169 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_176791.2 | Gene: | MMD1 / 842932 | AraportID: | AT1G66170 | Length: | 704 | Species: | Arabidopsis thaliana |
| Alignment Length: | 546 | Identity: | 101/546 - (18%) |
|---|---|---|---|
| Similarity: | 161/546 - (29%) | Gaps: | 227/546 - (41%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 619 HVVE-----NGFAFIGGLKVKIQDNLYVCPR--------------------EDCAKTYRKEDFLL 658
Fly 659 IHIRHYHKEFAE-HVSHC-------PKMQELAVKRTHPSSIDQVE----AVPKNQIPNQ--QFFA 709
Fly 710 KMHQQDLQQSRSFKRQSVSATATSSTPSDITP-TKALLSPKMEPPSVSPTVESGIKQEDVSLDAG 773
Fly 774 PTQSFNPSLSRSCKRARLSPSKRPSGSRKSNR----------QRSQRRPILSDNPAGHGLTEQDV 828
Fly 829 EETR--------------QSFNTPT-----------PDTRI---------------DSKKRRSGA 853
Fly 854 --ATTPISSIDSPAMGDSVSTPSSNDQTDI-----NAALAPPPAETLSKAPQ-------YIKE-- 902
Fly 903 -------------------------------NGELIRI--------VRMRQEE------------ 916
Fly 917 -------------------------------------------IINCICEYGEEDG-LMIQCELC 937
Fly 938 LCWQHGACNGIVKEADVPDKYVCYIC 963 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| MBD-R2 | NP_731688.2 | THAP | 5..84 | CDD:461662 | |
| MBT_PHF20L1-like | 215..282 | CDD:439094 | |||
| Tudor_PHF20-like | 288..337 | CDD:410457 | |||
| MeCP2_MBD | 449..522 | CDD:238690 | |||
| PHD_SF | 919..963 | CDD:473978 | 18/44 (41%) | ||
| PRK04778 | <1099..>1153 | CDD:179877 | |||
| MMD1 | NP_176791.2 | PHD_MMD1_like | 608..653 | CDD:277031 | 18/44 (41%) |
| Blue background indicates that the domain is not in the aligned region. | |||||