DRSC/TRiP Functional Genomics Resources

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Protein Alignment MBD-R2 and AT2G07714

DIOPT Version :10

Sequence 1:NP_731688.2 Gene:MBD-R2 / 41498 FlyBaseID:FBgn0038016 Length:1169 Species:Drosophila melanogaster
Sequence 2:NP_178796.1 Gene:AT2G07714 / 815388 AraportID:AT2G07714 Length:196 Species:Arabidopsis thaliana


Alignment Length:119 Identity:31/119 - (26%)
Similarity:44/119 - (36%) Gaps:32/119 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CPSTSRLLEHNGVTYHSFPLDPIIRAIWIKNSRISLERQITKS------------VLVCSRHFRR 62
            |..:..:.||:   ||        |||....| |||...||.:            ::.|.|....
plant    50 CSGSFGVEEHH---YH--------RAIAFLTS-ISLVDDITANFRENKANLNIGDIVRCYRDMSE 102

  Fly    63 LDFNTIRN-GKYLL--KPRVFPTVFPWGKMDTAEIEADQRALQHASVEGTTETP 113
            :...|::: .:::|  |.|..|...|.||     |||....|......||...|
plant   103 IQLTTLQDLLRFMLTIKSRAPPIRIPIGK-----IEAPSVVLPSMKAYGTRACP 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MBD-R2NP_731688.2 THAP 5..84 CDD:461662 21/88 (24%)
MBT_PHF20L1-like 215..282 CDD:439094
Tudor_PHF20-like 288..337 CDD:410457
MeCP2_MBD 449..522 CDD:238690
PHD_SF 919..963 CDD:473978
PRK04778 <1099..>1153 CDD:179877
AT2G07714NP_178796.1 None
Blue background indicates that the domain is not in the aligned region.

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