DRSC/TRiP Functional Genomics Resources

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Protein Alignment MBD-R2 and AT2G01810

DIOPT Version :10

Sequence 1:NP_731688.2 Gene:MBD-R2 / 41498 FlyBaseID:FBgn0038016 Length:1169 Species:Drosophila melanogaster
Sequence 2:NP_178290.1 Gene:AT2G01810 / 814712 AraportID:AT2G01810 Length:697 Species:Arabidopsis thaliana


Alignment Length:409 Identity:78/409 - (19%)
Similarity:126/409 - (30%) Gaps:168/409 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   631 LKVKIQDNLYVCPREDCAKTYRKE-------DFLLIHIRHYHKEFAEHVSHCPKM---QELAVKR 685
            |||..:.|..: .|:|..:..|..       ||||.||              .|:   .::..:.
plant   387 LKVFKERNSTI-SRQDLREAVRSSIGDTGLIDFLLKHI--------------DKVLIGDQIVQRS 436

  Fly   686 THPSSIDQVEAVPKNQIPNQQFFAKMHQQDLQQSRSFKRQSVSATATSSTP-----SDIT----- 740
            |:|.|       ...|...:...:::.:|..::.|..|.|..| ..||:||     .||.     
plant   437 TNPKS-------RMLQFSLRTINSRVQEQKRKKKRKVKPQETS-ECTSTTPGLSPYDDILYLYQN 493

  Fly   741 -----PTKALLSPKMEPPSVSPTVESGIKQEDVSLDAGPTQSFNPSLSRSCKRARLSPSKRPSGS 800
                 |...|.|   |...|....:|.:|:...       |..| .|:.||:             
plant   494 LLLTYPDSDLYS---EASQVILKCKSFVKEWSY-------QEQN-HLTVSCQ------------- 534

  Fly   801 RKSNRQRSQRRPILSDNPAGHGLTEQDVEETRQSFNTPTPDTRIDSKKRRSGAATTPISSIDSPA 865
                        :|.::           ||..:.|....|.                        
plant   535 ------------VLPNH-----------EELLRDFTRLLPP------------------------ 552

  Fly   866 MGDSVSTPSSNDQTDINAALAPPPAETLSKAPQYIKENGELIRIVRMRQEEI------------- 917
             ||.|:.|.:....::.:|     ||.:.:....|.|..|::.|.....|::             
plant   553 -GDLVAVPENATIRELKSA-----AEKVLRDTYCITETFEVLEIRNRYLEKLDDNVSLKSQGNTE 611

  Fly   918 ------------------------INCICEYGEEDG-LMIQCELCLCWQHGACNGIVKEADVPDK 957
                                    ::|.|...::|| .|:.|:.|..|.|..||.|..:..||..
plant   612 FMVKGFGLDIGTELRYEGGFDDWTVDCKCGARDDDGERMVACDACKVWHHTLCNSIEDDEAVPSV 676

  Fly   958 YVCYICRNPQRGRDSMRFK 976
            ::|.:|..     ||:|.|
plant   677 FLCNMCYG-----DSLRSK 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MBD-R2NP_731688.2 THAP 5..84 CDD:461662
MBT_PHF20L1-like 215..282 CDD:439094
Tudor_PHF20-like 288..337 CDD:410457
MeCP2_MBD 449..522 CDD:238690
PHD_SF 919..963 CDD:473978 15/44 (34%)
PRK04778 <1099..>1153 CDD:179877
AT2G01810NP_178290.1 PHD_MMD1_like 637..682 CDD:277031 15/44 (34%)
Blue background indicates that the domain is not in the aligned region.

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