Sequence 1: | NP_731688.2 | Gene: | MBD-R2 / 41498 | FlyBaseID: | FBgn0038016 | Length: | 1169 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_499819.3 | Gene: | set-16 / 176802 | WormBaseID: | WBGene00011729 | Length: | 2475 | Species: | Caenorhabditis elegans |
Alignment Length: | 1276 | Identity: | 216/1276 - (16%) |
---|---|---|---|
Similarity: | 399/1276 - (31%) | Gaps: | 423/1276 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 VTYHSFPLDPI-----IRAIWIKNSRI--SLERQITKSVLVCSRHFRRLDFNTIRNGKYLLKPRV 79
Fly 80 FPTVFPWGKMDTAEIEADQRAL---------QHASVEGTTETPGNAQSSTNDDVIKATVDQIVAQ 135
Fly 136 ILSESAERKATEEGKTGKAADDVKNTPESGEDANKAAAKEPSGTPVAASSEATVPAP-------- 192
Fly 193 ----GSASSSNSPLPG------TPPKYS--NPHNLTIGARLEALSVEGNWLPARIVEVNETEQTL 245
Fly 246 LVRFERNHKLK--------VSPSTSGSFQEWMAI------KSERLRQRLSNRVLPVFELDEKCMA 296
Fly 297 RW----SGPRK-FPGTIRKLLGNDTYEVLFDDGYVKNVRAVHMNKMPKQLPPVQVAEEGASKSPT 356
Fly 357 PVGTPVSSAPVAPKRASTGSLGGSSGSSGSKKSKCAPQRRDWPLLDMASLDIASLGLPEIPHDG- 420
Fly 421 ---------EWTCHWVNDQPIGTEGFLIVGEHQKPTVIVQDWRLPPGWIKHMYQRSNVLGKWDVI 476
Fly 477 LVSPSGKRF--RSKSDLKLFLESQNLV-YNPDVYDFSIHRRRAKDINAYVYTHGYNPQPPPKPRP 538
Fly 539 MDVSMNSTLDQSITSQHSLPSTPMPVKESQYMEAPVASLMP----------PAELMSPQTQPADE 593
Fly 594 TK--PKIEA----EILEASEGGTSQLMLADPHVVENGFAFIGGLKVKIQDNLYVCPREDCAKTYR 652
Fly 653 KEDFLLIHIRHYHKEFAEHVSHCPKMQELA--VKRTHPSSIDQVEAVPKNQIPNQQFFAKMHQQD 715
Fly 716 LQQSRSFKRQSVSATATSSTPSDITPTKALLSPKMEPPSVSPTVESGIKQEDVSLDAGPTQSFNP 780
Fly 781 SLSRSCKRARLSPSK-------------RPSGSRKSNRQRSQRRPILSDNPAGHGL----TEQDV 828
Fly 829 EETRQSFNTPTPDTRIDSKK---RRSGAATTPISSIDSPAMGDSVSTPSSNDQTDINAALAPPPA 890
Fly 891 ETLSKAPQYIKENGELIRIV--------RMRQEEIINCICEYGEEDGLMIQCELCLCWQHGACNG 947
Fly 948 IVKEADVPDKYVCYICRNPQRGRDSMRFKHDQDW------LFEGKLPVA---AYHTANPQ---AT 1000
Fly 1001 KQFELLKRSHTLTGNLLDAKRSMHSLLVKINIARNRCHPKLYLWAKKWDEDNLDSTALTPVKRAK 1065
Fly 1066 LEAPD--LPNVPQPEAAIDPEEC-------QYRLI------------------EHIKV-QQSLV- 1101
Fly 1102 -LDRLNDIEAEMDELEKEDTLDDLKDADISTTKEALATFIK 1141 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
MBD-R2 | NP_731688.2 | THAP | 4..86 | CDD:283206 | 13/70 (19%) |
TUDOR | 292..329 | CDD:119391 | 8/41 (20%) | ||
MeCP2_MBD | 449..522 | CDD:238690 | 8/75 (11%) | ||
PHD_SF | 919..963 | CDD:304600 | 5/43 (12%) | ||
set-16 | NP_499819.3 | PHD_SF | 42..84 | CDD:276966 | |
PHD4_KMT2C_like | 427..477 | CDD:276987 | |||
PHD5_KMT2C_like | 479..524 | CDD:276988 | |||
PHD6_KMT2C_like | 554..604 | CDD:276989 | |||
DUF1351 | 1060..>1163 | CDD:284492 | 20/112 (18%) | ||
ePHD2_KMT2C_like | 1904..2008 | CDD:277136 | 18/109 (17%) | ||
FYRN | 2055..2104 | CDD:283589 | 3/5 (60%) | ||
FYRC | 2112..2199 | CDD:197781 | |||
SET | 2333..2457 | CDD:214614 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4489 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |