DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10041 and gd

DIOPT Version :9

Sequence 1:NP_650177.2 Gene:CG10041 / 41496 FlyBaseID:FBgn0038014 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster


Alignment Length:202 Identity:43/202 - (21%)
Similarity:75/202 - (37%) Gaps:61/202 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FAAMSAAQETLSDTPQNSTPLLATTVSTTKVISFRPRYPYIVSIGENLKGYYKHLCVGVILSNEF 77
            |...|.|:...||: .:|.|.:.           |..:|::.:|..|........|.|.::|...
  Fly   237 FVDESEAEAIESDS-ADSLPSIT-----------RGSWPWLAAIYVNNLTSLDFQCGGSLVSARV 289

  Fly    78 VLSAAHCI----QTNPTKQLYVAGGADSLNSRKQTRFFVVERRW---------------HPQFRV 123
            |:|:|||.    :...:.::.|..|..:|            :.|               ||.|..
  Fly   290 VISSAHCFKLFNKRYTSNEVLVFLGRHNL------------KNWNEEGSLAAPVDGIYIHPDFNS 342

  Fly   124 LGGN---DIAVLRIYPKFPLDDVRFRSI-------NFAGKPQRDSGTQASLVGWG--RVGVGKIR 176
            ...:   ||||:.:     .|:|||.:.       :.:.|.:...|.:..::||.  |....:.:
  Fly   343 QLSSYDADIAVIIL-----KDEVRFNTFIRPACLWSGSSKTEYIVGERGIVIGWSFDRTNRTRDQ 402

  Fly   177 KL-QEMP 182
            || .|:|
  Fly   403 KLSSELP 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10041NP_650177.2 Tryp_SPc 49..264 CDD:238113 35/166 (21%)
gdNP_001259479.1 GD_N 27..124 CDD:292649
Tryp_SPc 257..526 CDD:238113 36/181 (20%)
Tryp_SPc 258..526 CDD:214473 36/180 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456165
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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