DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10013 and ube3d

DIOPT Version :9

Sequence 1:NP_650175.2 Gene:CG10013 / 41494 FlyBaseID:FBgn0038012 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001313339.1 Gene:ube3d / 553294 ZFINID:ZDB-GENE-091218-3 Length:388 Species:Danio rerio


Alignment Length:463 Identity:95/463 - (20%)
Similarity:151/463 - (32%) Gaps:187/463 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MRSKNWINVLLLRSMDLFQPLLVESSNVSQLIEVSPNGISWHEKNVEYRIIMDEFFDIITRTNAG 75
            :|.|....:|.:||.       |........||..|:.|    .||:   ..|..|. :|.|.. 
Zfish    14 LRQKLQSGLLFIRSD-------VIGGGADVKIESKPDSI----LNVQ---TPDSSFQ-VTLTPG- 62

  Fly    76 DVPITLVEM----------KGSHVSFGLYLRRIRY--------SILDALTINVELGELPMCISPY 122
               ::|||.          :|||     |..|::.        |::..|.::             
Zfish    63 ---VSLVETQKQKSPANSEQGSH-----YRLRLKVEQPTESPCSVIGQLRVD------------- 106

  Fly   123 NSCSLHCSNCTNEIIGQRQYYHIQEVP--ITTILPQNYFC---PRNRIPVYPSEEELYYGLNYLV 182
            .|.|:.|.:|.:.::..|.:..:..:|  ....|..::.|   |.....:.|...:...|..:::
Zfish   107 ESYSVLCQSCGSRVLQHRSFGRVLPLPNGNWNALVDDWCCHPDPFANRKLLPRAGDCLLGDTFIL 171

  Fly   183 V-----CSELLGNGVKTIAGRRRVL--CSRCKKCVGEFITRDVGVQLYADALRFVTLDSPLEFKE 240
            :     |.|.|...    |..:|||  |.||...:||.||.:| ::||.                
Zfish   172 LLRDDGCDESLTRA----AAEKRVLVSCRRCSTALGEEITAEV-LKLYI---------------- 215

  Fly   241 IFGHVTPTQIMMRLVNDGEICGPDQ----------RRLFLKAV--------------------RP 275
                   |:|.::...||| |...|          |:.||:..                    .|
Zfish   216 -------TEISVKPSEDGE-CDLTQLSLEPKSESVRQRFLEQTLASRLVELSAAQSIFRFSIQSP 272

  Fly   276 DGQLQLL--HLEMDT-----------------------------------KQMHILRSELKLPDI 303
            ||:.::|  .|..||                                   |.::||.|:.||.|:
Zfish   273 DGKAEILLWLLNTDTLVASFPAPAARADGFISVGDSHPRMHQSCQAVAAVKVLYILCSDSKLRDV 337

  Fly   304 KKPDIDLPMEVDTSSESDVDMNVSDTSSSNSMPQTGDEELAPTPRSTTPRGTPTKTVQYVRLRGF 368
                      ||. .|.|:.::      ...:||...|||.....|:|.| .|      ..||..
Zfish   338 ----------VDV-WEKDISVH------PLPLPQRSCEELKTLLTSSTFR-LP------AFLRCM 378

  Fly   369 RGWRVRYL 376
            ..::|.|:
Zfish   379 NSFQVAYM 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10013NP_650175.2 HECT_2 <125..>256 CDD:303071 29/142 (20%)
ube3dNP_001313339.1 HECT_2 13..378 CDD:286852 93/453 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4784
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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