Sequence 1: | NP_001369011.1 | Gene: | svp / 41491 | FlyBaseID: | FBgn0003651 | Length: | 826 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_008848.1 | Gene: | RXRG / 6258 | HGNCID: | 10479 | Length: | 463 | Species: | Homo sapiens |
Alignment Length: | 464 | Identity: | 169/464 - (36%) |
---|---|---|---|
Similarity: | 240/464 - (51%) | Gaps: | 70/464 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 117 PSANGGSAGGHHSGSGSGSGS-GVNPGHGSDMLPLIK--------------------GHGQDMLT 160
Fly 161 SIKGQPTGCGSTTPSSQANSSHSQSSNSGSQIDSKQNIE-------------------------C 200
Fly 201 VVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMGM 265
Fly 266 RREAVQRGRVPPTQPGLAGMHGQYQIANGDPMGIAGFNGHSYL--SSYISLLLRAEPYPTSRYGQ 328
Fly 329 CMQPNNIMG-IDNICELAARLLFSAVEWAKNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMP 392
Fly 393 LHVAPLLAAAGLHASPMAADR--VVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTTDAC 455
Fly 456 GLSDVTHIESLQEKSQCALEEYCRTQYPNQPTRFGKLLLRLPSLRTVSSQVIEQLFFVRLVGKTP 520
Fly 521 IETLIRDML 529 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
svp | NP_001369011.1 | NR_DBD_COUP_TF | 200..272 | CDD:143516 | 45/71 (63%) |
NR_LBD_COUP-TF | 307..542 | CDD:132746 | 94/228 (41%) | ||
RXRG | NP_008848.1 | Modulating. /evidence=ECO:0000250 | 1..138 | 25/127 (20%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 18..53 | 11/36 (31%) | |||
Nuc_recep-AF1 | 25..133 | CDD:314658 | 17/107 (16%) | ||
NR_DBD_RXR | 137..213 | CDD:143514 | 46/75 (61%) | ||
Hinge | 205..230 | 7/37 (19%) | |||
NR_LBD_RXR_like | 233..441 | CDD:132741 | 86/211 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X118 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |