Protein Alignment svp and nr2c1

DIOPT Version :10

• Sequence 1: NP_001369011.1
• Gene: svp / 41491
• FlyBaseID: FBgn0003651
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_001016207.1
• Gene: nr2c1 / 548961
• XenbaseID: XB-GENE-484727
• Length: 636
• Species: Xenopus tropicalis
• Alignment Length: 515
• Identity: 157/515 - (30%)
• Similarity: 230/515 - (44%)
• Gaps: 157/515 - (30%)

  Fly   172 TTPSSQANSSHSQSSNSGSQID---SKQNIE-CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNL 232
            :||...|  .|.|..:....:|   :||.:| |||||||:||:|||..||||||.|||||:|:||
 Frog   122 STPDVPA--QHIQILSDTQCLDQNLNKQLVELCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNL 184

  Fly   233 TYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAVQRGRVP--------------------- 276
            .|:||||::|.|::|:||:||||||::|:.:||::::||..|.|
 Frog   185 VYTCRGSKDCVINKHYRNRCQYCRLQRCIALGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIR 249

  Fly   277 -----P----------------------------TQPGLAG-----MHGQYQIANGDPMGIAGF- 302
                 |                            .|.|:..     ...:.....||...:|..
 Frog   250 KDLRSPLAATTTFVTENKTSRTTSLLDSGMLVNIQQSGVKNESILITPNKVDACQGDLSTLANVV 314

  Fly   303 --------------------------NGHSYLS--------------SYISLLLRAEPYPTSRYG 327
                                      ||.|.||              ::.:|.........|..|
 Frog   315 TSLANLNKSKELPQTNTELSIIESLSNGDSSLSELAQDDQSNSEVTRAFDTLAKALNQSENSAQG 379

  Fly   328 --QCMQPNN-------------------------------IMGIDNICELAARLLFSAVEWAKNI 359
              :|:..|:                               .:.:..|||.|:||||.::.||::|
 Frog   380 SSECVGSNSNLTDANVEIEGPLLSDAHIAFRLTMPSPMPEYLNVHYICESASRLLFLSMHWARSI 444

  Fly   360 PFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAPLLAA--AGLHAS----PMAADRVVAFM 418
            |.|..|...:.::|::..|:|||.|..:||...::|..:|||  ..||.|    .::||:|...|
 Frog   445 PSFQSLGQENSISLVKACWNELFSLGLAQCCQVMNVETILAAFVNHLHNSMQHDKLSADKVKLVM 509

  Fly   419 DHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTTDACGLSDVTHIESLQEKSQCALEEYCRTQYP 483
            |||...||....:..|.||..||:.||||.||:.|..||.:|:|||.||||:....::|....||
 Frog   510 DHIFKLQEFCNSMVKLSVDGYEYAYLKAIALFSPDHPGLENVSHIEKLQEKAYMEFQDYVTKTYP 574

  Fly   484 NQPTRFGKLLLRLPSLRTVSSQVIEQLFFVRLVGKTPIETLIRDMLLSGNSFSWPYLPSM 543
            ....|..:||||||:||.:::.:.|:|||..|:|...|:::|            ||:..|
 Frog   575 EDTYRLSRLLLRLPALRLLNAAITEELFFAGLIGNVQIDSII------------PYILRM 622

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
svp	NP_001369011.1	NR_DBD_COUP_TF	200..272	CDD:143516	46/71 (65%)
		NR_LBD_COUP-TF	307..542	CDD:132746	89/287 (31%)
nr2c1	NP_001016207.1	NR_DBD_TR2_like	147..233	CDD:143525	51/85 (60%)
		NR_LBD_TR2_like	401..622	CDD:132750	82/232 (35%)