Protein Alignment svp and unc-55

DIOPT Version :9

• Sequence 1: NP_001369011.1
• Gene: svp / 41491
• FlyBaseID: FBgn0003651
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_001122482.2
• Gene: unc-55 / 192082
• WormBaseID: WBGene00006790
• Length: 370
• Species: Caenorhabditis elegans
• Alignment Length: 407
• Identity: 140/407 - (34%)
• Similarity: 213/407 - (52%)
• Gaps: 77/407 - (18%)

  Fly   170 GSTTPSSQANSSHSQSSNSGSQIDSKQNIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTY 234
            ||:..:|..|||...:             :||||||||||||||||:|||||||||||:||:|:|
 Worm     4 GSSGAASLGNSSPDAT-------------DCVVCGDKSSGKHYGQFSCEGCKSFFKRSIRRSLSY 55

  Fly   235 SCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRRE------------AVQRGRVPPTQPGLAGMHG 287
            :||.::||.||..||||||||||.||::||||:|            ||||||:|.|.|.|
 Worm    56 TCRATKNCAIDVQHRNQCQYCRLTKCIRMGMRKEGRRSNETQTAVSAVQRGRLPVTMPSL----- 115

  Fly   288 QYQIANGDPMGIAGFNGHSYLSSYISLLLRAEPYPTSRYGQCMQPNNIMGIDNICELAARLLFSA 352
                          |..:.:|.|....:  :.|:......|..:|:.   .::|.|.||:.:|:.
 Worm   116 --------------FPPNMFLRSPFPFM--SVPFNPLMTAQFTKPSI---KESIFEFAAQTIFAT 161

  Fly   353 VEWAKNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAPLLAAAGLHA----------- 406
            |.||:.  ....|...||:.|||..|:.:|:...:|.:..|:::..|.|....|
 Worm   162 VNWART--SMSNLVKGDQLILLRHSWTPIFIFALAQSNFALNLSTHLTAVTATAASTENGSSSLG 224

  Fly   407 --------SPMAADRVVAFMDHIRI--FQEQVEKLKALHVDSAEYSCLKAIVLFTTDACGLSDVT 461
                    |....:||   .|..:.  ||.:::|::..|:|..|.|.|:|::||:.|...|.:..
 Worm   225 SKSEDEEKSEEKPERV---FDEPQFQGFQAKIDKIRDFHLDVVESSSLRAVLLFSCDEEALEEKG 286

  Fly   462 HIESLQEKSQCALEEYCRTQYPNQPTRFGKLLLRLPSLRTVSSQVIEQLFFVRLVGKTPIETLIR 526
            .||.:.||.:.|::|||:..  .:..|:.::...|..|::..:..|.:|||.||:|.||:||::.
 Worm   287 KIEEIVEKLKSAVDEYCKMN--KRSERYHQICECLQLLKSTRNLPISRLFFSRLLGTTPLETILS 349

  Fly   527 DMLLSGNSFSWPYLPSM 543
            |:|::....:.|:.|.:
 Worm   350 DLLITPPPPTLPFFPQL 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
svp	NP_001369011.1	NR_DBD_COUP_TF	200..272	CDD:143516	56/83 (67%)
		NR_LBD_COUP-TF	307..542	CDD:132746	68/255 (27%)
unc-55	NP_001122482.2	NR_DBD_COUP_TF	21..89	CDD:143516	53/67 (79%)
		NR_LBD_F2	148..325	CDD:132728	49/183 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	132	1.000	Domainoid score	I3192
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S3459
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001162
OrthoInspector	1	1.000	-	-		oto19213
orthoMCL	1	0.900	-	-		OOG6_106204
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3161
SonicParanoid	1	1.000	-	-		X118
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	8.790