Protein Alignment svp and nhr-91

DIOPT Version :9

• Sequence 1: NP_001369011.1
• Gene: svp / 41491
• FlyBaseID: FBgn0003651
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_001024953.1
• Gene: nhr-91 / 181621
• WormBaseID: WBGene00003681
• Length: 474
• Species: Caenorhabditis elegans
• Alignment Length: 477
• Identity: 129/477 - (27%)
• Similarity: 192/477 - (40%)
• Gaps: 147/477 - (30%)

  Fly   145 SDMLPLIKGHGQDMLTSIKGQPTGCGSTTPSSQANSSHS----------------QSSNSGSQID 193
            |.::|.:|...:|.:|     |:...:.:|:|:.:.|.|                .:||:.|:..
 Worm    37 STLVPPMKLDMRDSMT-----PSFSQTESPNSETDDSTSAANKVLFSILGTPTTDSTSNAVSKSS 96

  Fly   194 SKQNIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLK 258
            ||.   |.||||||:|.|||..||||||.||||||:....|.|.....|.||:.:||:||.||.:
 Worm    97 SKL---CSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQNRNRCQSCRFR 158

  Fly   259 KCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANGDPMGIAGFNGHSYLSSY---ISLLLRAEP 320
            ||:..||..|||:..|:|                       .|.||:|..|:|   .|::.:.:.
 Worm   159 KCISKGMLTEAVREDRMP-----------------------GGRNGNSIYSNYKQRRSIIRKTKD 200

  Fly   321 Y------------PTSR------------------YGQCMQPNNIMGIDNICELAAR----LLFS 351
            |            |:.:                  .|..:.|:....|...|:...|    ::..
 Worm   201 YVEEQERRPFQSLPSGKKLIKELVEMDCLDRLINLKGLRINPSANCDIAPACKRLTRIGDEIVEQ 265

  Fly   352 AVEWAKNIPFFPELQVTDQVALLRLVWSELFVLNAS--QCSMPLHVAPLLAAAGLHASPMAADRV 414
            .|||.|.:|||.||.|.....||...|:||.:|:|.  .||:   ..|        .||...:.:
 Worm   266 LVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSV---FTP--------DSPDTTEMI 319

  Fly   415 -----VAFMD---HIRIFQ-------------EQVEK---------------LKALHVDSAEYSC 443
                 ::|.:   ::|:.|             |.|.|               ...|.|....|.|
 Worm   320 DETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTRFTTLLHSFSNLKVSPEAYVC 384

  Fly   444 LKAIVLFTTDACGLSDVTHIESLQEKSQCALEEYCRT-----QYPN---QPTRFGKLLLRLPSLR 500
            :|||.|....|    |.|...|:.:|.....:.:.:|     ..|.   |.|...::|..||.||
 Worm   385 IKAITLLHLSA----DSTLDRSIIDKVNTLQDHFVKTLQIHLHQPGEDAQTTSLAQILDWLPDLR 445

  Fly   501 TVSSQVI-EQLFFVR-LVGKTP 520
            ..||.:: .::|:|. |:.|.|
 Worm   446 NASSVLLHSKMFYVPFLLCKNP 467

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
svp	NP_001369011.1	NR_DBD_COUP_TF	200..272	CDD:143516	41/71 (58%)
		NR_LBD_COUP-TF	307..542	CDD:132746	67/299 (22%)
nhr-91	NP_001024953.1	NR_DBD_DHR4_like	92..181	CDD:143542	47/114 (41%)
		NR_LBD_DHR4_like	222..465	CDD:132751	60/257 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910