Protein Alignment svp and nhr-107

DIOPT Version :9

• Sequence 1: NP_001369011.1
• Gene: svp / 41491
• FlyBaseID: FBgn0003651
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_504770.2
• Gene: nhr-107 / 179083
• WormBaseID: WBGene00003697
• Length: 357
• Species: Caenorhabditis elegans
• Alignment Length: 379
• Identity: 78/379 - (20%)
• Similarity: 135/379 - (35%)
• Gaps: 113/379 - (29%)

  Fly   198 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVR-RNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCL 261
            :.|:||...|:..|:|...|..|.:||:|.|. :.||..|:    |...:..:..|:.||:|||.
 Worm     2 VNCMVCDASSAQYHFGAIACRACAAFFRRYVNSKKLTILCK----CLSKKESQYPCRLCRMKKCK 62

  Fly   262 KMGMRREAVQRGRVPPTQPGLAGMHGQYQIANGDPMGIAGFNGHSYLSSYISLLLRAEPYPTSRY 326
            .:||....||               |...:.|  |..|....|.|...|.:|.:         .|
 Worm    63 AVGMEASKVQ---------------GPRDVNN--PFKIKMIEGSSSPESTLSSI---------EY 101

  Fly   327 GQCMQP----------NNIMGID-------------------NICELA------ARLLFSAVEWA 356
            |  :||          .|...::                   |:.||:      ::|::...|
 Worm   102 G--LQPRDSELIKLIIKNYKNLEMTREAIYNMTPSTTGTMQVNLYELSLEVKTDSKLMWKLCE-- 162

  Fly   357 KNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAP-LLAAAG--------LHASPMAAD 412
            ...|.|.:|...|:..|....:|:..:|..:..:...:.:. ..:.:|        .:.:.:..:
 Worm   163 DTFPEFNQLCKMDKRILFNNFYSKWSILEVTMLATKYNDSKNFYSPSGAMCTSINEFYVNTVRDN 227

  Fly   413 RVVAFMDHIRIFQ-------EQV-EKLKALHVDSAEYSCLKAIVLFTTDACGLSDVTHIESLQEK 469
            ..::..|.||:|:       ||| :...||.::..|...|..|:.:......:||
 Worm   228 SAISQEDIIRVFEPYWKYHFEQVIDPFLALKLNDMENMALFGIIFWDGSYTNISD---------- 282

  Fly   470 SQCALEEYCRTQYPNQPTRFGKLLLRLPSLR-----TVSSQVIEQLFFVRLVGK 518
               .|.|.|.:        ..|::.|..|..     |.||:..|.|..:.::.|
 Worm   283 ---ELSELCHS--------MRKIICRELSAHFNETCTTSSRFFETLDTLNIIEK 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
svp	NP_001369011.1	NR_DBD_COUP_TF	200..272	CDD:143516	25/72 (35%)
		NR_LBD_COUP-TF	307..542	CDD:132746	46/269 (17%)
nhr-107	NP_504770.2	ZnF_C4	3..66	CDD:197701	22/66 (33%)
		NR_LBD	145..325	CDD:132726	37/202 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910