DRSC/TRiP Functional Genomics Resources

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Protein Alignment svp and LOC1281831

DIOPT Version :10

Sequence 1:NP_001369011.1 Gene:svp / 41491 FlyBaseID:FBgn0003651 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_061500556.1 Gene:LOC1281831 / 1281831 VectorBaseID:AGAMI1_011084 Length:505 Species:Anopheles gambiae


Alignment Length:507 Identity:135/507 - (26%)
Similarity:188/507 - (37%) Gaps:205/507 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMG 264
            |.||||::||||||..:|:||:.|||||:||||.|.|:....|.:|...|||||.||..|||:..
Mosquito    25 CKVCGDRASGKHYGVPSCDGCRGFFKRSIRRNLEYVCKEGGKCVVDVSRRNQCQACRFAKCLQAN 89

  Fly   265 MRREAVQRGRVP----PTQPGLAGM--HGQYQIAN------------------------------ 293
            |||||||..|.|    |....::|:  ||.|..|.                              
Mosquito    90 MRREAVQHERAPRNCTPLTATVSGLSAHGDYYAARTSFAALPQANLFFPLPLHITAAAASGPFAP 154

  Fly   294 -GDP---------------------------------------------------MGIAGFNG-- 304
             .||                                                   .|:|..:|  
Mosquito   155 IADPGRFLSPYAQSLAAAAANSTSFDHFPPPIPPPPPPAPATTRRTSPTAFQPTSTGLAPGSGLV 219

  Fly   305 -------------------------------------------------HSYLSSYISLLLRAE- 319
                                                             || :||.:||....| 
Mosquito   220 QVPVPLPASTAVSKANLVSEGSQMATTITESMFNSITGDSLVLPAPPPIHS-ISSILSLSSAKEN 283

  Fly   320 ---------PYPTSRYGQCM----------------QPNNIMG--------IDNICELAARLLFS 351
                     | |....||..                ||.:|.|        .|.:.|.||:|||.
Mosquito   284 EVSSTGEESP-PRGSSGQQQQQQQQQQQYHHSVLFGQPGSITGSMHAVKSETDMLLESAAKLLFL 347

  Fly   352 AVEWAKNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPL---HVAPLLAAAGLHASPMAADR 413
            ||:|||.:|.|.:|...||..||...|:||||:.|:|..:|:   .:|         .:|.|.. 
Mosquito   348 AVKWAKTVPSFLQLPANDQKLLLEEAWAELFVITAAQWGLPIDNEFIA---------RNPQAVK- 402

  Fly   414 VVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTTDACGLSDVTHIESLQEKSQCALEEYC 478
                      .|..:::.....||..|.:||||:|||..|...|.....:..||:::...|.|.|
Mosquito   403 ----------LQSAIQQFGIARVDYREAACLKALVLFRPDQPRLYAAHEVLLLQDQTVALLHEKC 457

  Fly   479 RTQYPNQPTRFGKLLLRLPSLR-TVSSQVIEQLFFVRLVGKTPIETLIRDML 529
                  ...|.|.|||.||::: ..:::|::::.|.:.||:..||.|:.|::
Mosquito   458 ------GGVRLGHLLLLLPAIKAAANAKVLQEMLFRKTVGEVAIERLLLDLM 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svpNP_001369011.1 NR_DBD_COUP_TF 200..272 CDD:143516 43/71 (61%)
NR_LBD_COUP-TF 307..542 CDD:132746 76/261 (29%)
LOC1281831XP_061500556.1 None

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