Protein Alignment svp and usp

DIOPT Version :10

• Sequence 1: NP_001369011.1
• Gene: svp / 41491
• FlyBaseID: FBgn0003651
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: XP_061504195.1
• Gene: usp / 1281377
• VectorBaseID: AGAMI1_013603
• Length: 519
• Species: Anopheles gambiae
• Alignment Length: 523
• Identity: 171/523 - (32%)
• Similarity: 250/523 - (47%)
• Gaps: 97/523 - (18%)

  Fly    79 SVASQQSAVIKQDLSCPSLNQAGS---------GH-----HPGIKEDLSSSLPSANGGSAG---- 125
            |||:...|..:.|.|...|  ||:         ||     .|.:|.||...:...||...|
Mosquito    18 SVAAIIQAQGRWDRSLAGL--AGTYQGFDAALVGHMGPLSPPDLKPDLKPDISLLNGSGGGPFSP 80

  Fly   126 GHHSGSGSGSGSGVNP---------------GHGSDMLPLIKGHG---QDMLTSIKGQPTGCGST 172
            |::.|.||....|.|.               |:|:....|:.|.|   |......:|...|.|.:
Mosquito    81 GNNCGPGSPGSGGFNSVVLQQQNALVVGGALGNGTGQQNLLVGGGSQQQQQQQQQQGSNGGGGGS 145

  Fly   173 TPSSQANSSHSQSSN---SGSQIDSKQNIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTY 234
            .|::.:|.:.....|   |||:      ..|.:|||::||||||.::|||||.||||:||::|:|
Mosquito   146 GPNTPSNITQQYPPNHPLSGSK------HLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSY 204

  Fly   235 SCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANGDPMGI 299
            :||..:||.||:..||:|||||.:|||..||:|||||..|               |.::...|..
Mosquito   205 ACREDKNCTIDKRQRNRCQYCRYQKCLACGMKREAVQEER---------------QRSSKFSMKS 254

  Fly   300 AGFNGHSYLSS-YISLLLRAE----------PYPTSRYGQ-CMQPNNIMG-IDNICELAARLLFS 351
            ...|..|.:.. .:...|.||          ..|..|.|| .|.|:...| :.::|::..:.::.
Mosquito   255 EEINSTSSVRDVVVDRFLEAEQIGEQKSGDNAIPYLRVGQNSMIPSEYKGAVSHLCQMVNKQIYQ 319

  Fly   352 AVEWAKNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVA----------------PLLA 400
            .:|:|:.:|.|..|...|||.|||..|:|:.:.:.:..||.....                |.|.
Mosquito   320 LIEFARRLPNFSNLPREDQVTLLRSGWNEMLIASVAWRSMEYIETERPPDGRNDGRVTIRQPQLM 384

  Fly   401 AAG----LHASPMAADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTTDACGLSDVT 461
            ..|    ||.:......|.:..|  ||..|...|:|.|.|:.||...||||:||.:|..||....
Mosquito   385 CLGPNFTLHRNSAQQAGVDSLFD--RILCELAIKMKRLDVNRAELGILKAIILFNSDIRGLKCRK 447

  Fly   462 HIESLQEKSQCALEEYCRTQYPNQPTRFGKLLLRLPSLRTVSSQVIEQLFFVRLVGKTPIETLIR 526
            .|:.::||....|:|||:||:|::..||.:||||||:||::|.:.|:.|.|:||:|...::..|.
Mosquito   448 EIDQMREKIYACLDEYCKTQHPSEDGRFAQLLLRLPALRSISLKCIDHLNFLRLLGDKQLDNFII 512

  Fly   527 DML 529
            :||
Mosquito   513 EML 515

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
svp	NP_001369011.1	NR_DBD_COUP_TF	200..272	CDD:143516	45/71 (63%)
		NR_LBD_COUP-TF	307..542	CDD:132746	81/256 (32%)
usp	XP_061504195.1	None