Protein Alignment svp and nr2e1

DIOPT Version :10

• Sequence 1: NP_001369011.1
• Gene: svp / 41491
• FlyBaseID: FBgn0003651
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: XP_002937209.2
• Gene: nr2e1 / 100491500
• XenbaseID: XB-GENE-483554
• Length: 386
• Species: Xenopus tropicalis
• Alignment Length: 405
• Identity: 139/405 - (34%)
• Similarity: 217/405 - (53%)
• Gaps: 75/405 - (18%)

  Fly   183 SQSSNSGSQIDSKQNIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSR--NCPID 245
            |:.:.|.|:|   .:|.|.||||:|||||||.:.|:||..|||||:|||.:|.|:...  .|.:|
 Frog     2 SKPTGSTSRI---LDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCLVD 63

  Fly   246 QHHRNQCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANGDPMGIAGFNGHSYLS- 309
            :.|||||:.|||||||::.|.::|||..|.|.|..      .:.|:|       ..|.||..::
 Frog    64 KTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTST------IRKQVA-------LYFRGHKEING 115

  Fly   310 -------------SYISLLLRAEPY---------------------PTSRYGQCMQPNNIMG--- 337
                         ::.:.:.:.||:                     ||.:|     |:.:.|
 Frog   116 STPHFPSAALPAPTFFTTVSQLEPHNLELTAISTTPERQTLVGLAQPTPKY-----PHEVNGAPL 175

  Fly   338 ------IDNICELAARLLFSAVEWAKNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVA 396
                  .:::||.||||||.:::|||::|.|..|.:.||:.||...|.|||||..:|.::|:..:
 Frog   176 YLYEVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDAS 240

  Fly   397 PLLAAAGLHASPMAADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFT--------TD 453
            .|||.:|:::....:.::...:..|:..||.|.:.:.|.:|:.|::|||.||.|.        ::
 Frog   241 TLLAVSGMNSDNTESQKLNKIISEIQALQEVVSRFRQLRLDATEFACLKCIVTFKAGVPPHSGSE 305

  Fly   454 ACGLSDVTHIESLQEKSQCALEEYCRTQYPNQPTRFGKLLLRLPSLRTVSSQVIEQLFFVRLVGK 518
            .....:...|.:||:::|..|..|..|:||.||.|||||||.||:||:::...||::||.:.:|.
 Frog   306 LRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSINPSTIEEVFFKKTIGN 370

  Fly   519 TPIETLIRDMLLSGN 533
            .||..|:.||..|.:
 Frog   371 VPITRLLSDMYKSSD 385

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
svp	NP_001369011.1	NR_DBD_COUP_TF	200..272	CDD:143516	42/73 (58%)
		NR_LBD_COUP-TF	307..542	CDD:132746	83/279 (30%)
nr2e1	XP_002937209.2	NR_DBD_TLX	8..99	CDD:143537	49/99 (49%)
		NR_LBD_Tlx_PNR_like	154..370	CDD:132748	74/220 (34%)