DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and glpQ

DIOPT Version :10

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_416742.1 Gene:glpQ / 946725 ECOCYCID:EG10399 Length:358 Species:Escherichia coli


Alignment Length:241 Identity:55/241 - (22%)
Similarity:84/241 - (34%) Gaps:66/241 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 IGHKGSGNTYRLGSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPS 434
            |.|:|:       |..:.|:||.....|....||.:|.|:.:|:|..:||.||..|..:......
E. coli    34 IAHRGA-------SGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADR 91

  Fly   435 FEDLLENQDLLIFAYENLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEV------------KVL 487
            |.|                         ..|||.....:: |:.|::|.:            ||.
E. coli    92 FPD-------------------------RARKDGRYYAID-FTLDEIKSLKFTEGFDIENGKKVQ 130

  Fly   488 RFAGSKGCDKSCDRMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPTFD 552
            .:.|.....||..|:...:.....:..|  ..:...::|...|||.|       |    |.....
E. coli   131 TYPGRFPMGKSDFRVHTFEEEIEFVQGL--NHSTGKNIGIYPEIKAP-------W----FHHQEG 182

  Fly   553 RNFYVDTILEIVLNKAG----KRRIVFCSFDADICAMVRFKQNVYP 594
            ::....| || ||.|.|    ..::....||||  .:.|.|..:.|
E. coli   183 KDIAAKT-LE-VLKKYGYTGKDDKVYLQCFDAD--ELKRIKNELEP 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 55/241 (23%)
glpQNP_416742.1 glpQ 5..358 CDD:236859 55/241 (23%)
Blue background indicates that the domain is not in the aligned region.

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