DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and GDPD5

DIOPT Version :10

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_177561.1 Gene:GDPD5 / 843761 AraportID:AT1G74210 Length:392 Species:Arabidopsis thaliana


Alignment Length:312 Identity:61/312 - (19%)
Similarity:105/312 - (33%) Gaps:97/312 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 LMEMCVRYLIIRPLP-------NFRCDLSHSYERYWRKNRLCMNIGHKGSGNTYRLGSDVVRENT 390
            |:.:|.....:.|||       ..:...|..|           ||.|:||...       :.|.|
plant    14 LLTVCAAGRTLHPLPVKGPKTVKLQLQTSRPY-----------NIAHRGSNGE-------IPEET 60

  Fly   391 LYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVL--RFMLQRMPSFEDLLENQDLLIFAYENLN 453
            ...:.:|:....|.:|.|:..::|..::.:||.:|  ...:.....|.|.....|:..|   |:.
plant    61 TAAYLKAIEEGTDFIETDILSSKDGVLICFHDCILDETTNVASHKEFADRKRTYDVQGF---NIT 122

  Fly   454 KLMLLAMGGSKRKDLIAVPLEAFSYD-QLKEVKVLRFAGSKGCDKSCDRMLLEQR---------- 507
            ..                    |::| .|||:|.||               ::||          
plant   123 GF--------------------FTFDFTLKELKQLR---------------IKQRYAFRDQQYNG 152

  Fly   508 PFPLLL---DLLDEENLPVDMGFLIEIKWPQMTNMR-RWESGSFKPTFDRNFYVDTILEIV---- 564
            .:|::.   .|....:.|..:|...|||.|.:.|.. :|..|        ..:.|.::|.:    
plant   153 MYPIITFEEFLTIARDAPRVVGIYPEIKNPVLMNQHVKWPGG--------KKFEDKVVETLKKYG 209

  Fly   565 -----LNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLEDPHSPVQYADQ 611
                 |:|...::.:|....|....:........|..||::|...|.|..:|
plant   210 YGGSYLSKKWLKKPLFIQSFAPTSLVYISNLTDSPKVLLIDDVTMPTQDTNQ 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 54/270 (20%)
GDPD5NP_177561.1 GDPD_ScGlpQ1_like 44..355 CDD:176544 55/282 (20%)
Blue background indicates that the domain is not in the aligned region.

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