Protein Alignment CG3942 and SNC4

DIOPT Version :10

• Sequence 1: NP_650171.2
• Gene: CG3942 / 41489
• FlyBaseID: FBgn0038008
• Length: 739
• Species: Drosophila melanogaster
• Sequence 2: NP_001323206.1
• Gene: SNC4 / 843016
• AraportID: AT1G66980
• Length: 1147
• Species: Arabidopsis thaliana
• Alignment Length: 598
• Identity: 99/598 - (16%)
• Similarity: 201/598 - (33%)
• Gaps: 192/598 - (32%)

  Fly   184 RQKPRLLYVHVQ--PMFEVPENPCNEPANPIKMVSSQTRLSRYLSTREIK--------AGN---- 234
            :.||.|.:::||  ..:|    ..|...:...:.:|:|....::|:.|:.        .||
plant   175 QMKPALFWLNVQHDEFYE----QHNLSMSSFLLSTSRTVSIDFISSPEVNFFRKIAGGFGNNGPS 235

  Fly   235 ---QYLQLAQVEVTNLCVQNALAAQQRFGARCGPKDMELFHCSIAFPEETLYRLDLYTY------ 290
               |::.....|.|......::.:...|        ::.|...|..|:..:..||...|
plant   236 FVFQFMGKEDFEPTTNRTYGSILSNLSF--------VKTFASGILVPKSYILPLDDKQYLLPHTS 292

  Fly   291 ----AHKAGYD----------EPPYHYGY-------------GFLMPDQLLGTEGSARVKITCAS 328
                |||||..          :..|:|.:             .|.:...|.....:|...:.|.|
plant   293 LVQDAHKAGLKLYASGFANDVDIAYNYSWDPVSEYLSFVDNGNFSVDGMLSDFPLTASASVDCFS 357

  Fly   329 ----------THRPLMEMCVRYLIIRP----LPNFRCDLSHSYERYWRKNRLCMNIGHKGSGNTY 379
                      ....|:.:...:|:|..    ||..|..:..            :.|...|:...|
plant   358 HIGRNATKQGNECNLLYISFLFLLIEQKHYHLPMVRASVDF------------LVISKNGASGEY 410

  Fly   380 RLGSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPSFEDL------ 438
            . |.      |...:::|:...:|:::..||::.|.             :....|..||
plant   411 P-GC------TKLAYEKAIKDGSDVIDCPVQMSSDG-------------IPFCSSSIDLVNSTTV 455

  Fly   439 ----LENQDLLIFAYENLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSC 499
                |.|:.:::....::..:...::...:.:.|.......|..:.:......|.:|:
plant   456 GQTHLRNRSIIVPEISSVAGIFTFSLTWHEIQSLTPAISNPFRENGMSRNPNERNSGN------- 513

  Fly   500 DRMLLEQRPFPLLLDLLDEENLPVD----MGFLIEIKWPQMTNMRRWESGSFKPTFDRNFYVDTI 560
                        |:.|.:..||..:    .|.||.::  .:..:|.      |...|       :
plant   514 ------------LISLYEFLNLAKNSTSLSGILISLE--NVVYLRE------KKGLD-------V 551

  Fly   561 LEIVLNK-------AGKRRIVFCSFDADICAMVRFK-QNVYPVTLLLEDPHSPVQYADQRVSVQD 617
            :::|||:       .|..:::..|  .....:|.|| |:.|.....:::....:..:    :::|
plant   552 VKVVLNRLTETGYIVGTLKVMIQS--TTRLVLVDFKNQSTYKTVYKIKETIGNITDS----AIED 610

  Fly   618 VAVRFCNSLEFLGLTLHANSLLNKPSTMAYLHQINLDAFVYGSSTIDLEIRNKLKKHGVLGIIYD 682
            :. :|.|::           ::||.|...     |.|:|:.|.:|..||   :|:|..:  .:|.
plant   611 IK-KFANAV-----------VINKASVFP-----NSDSFLTGQTTNVLE---RLQKFQL--PVYV 653

  Fly   683 RLDQLDQVGEELE 695
            .|.|.:.|.:..:
plant   654 ELFQNEFVSQPFD 666

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3942	NP_650171.2	CBM20_Prei4	44..164	CDD:99888
		GDPD_GDE5	368..684	CDD:176549	55/337 (16%)
SNC4	NP_001323206.1	GDPD_SHV3_repeat_1	51..352	CDD:176545	33/188 (18%)
		GDPD_SHV3_repeat_2	398..698	CDD:176546	58/363 (16%)
		STKc_IRAK	840..1110	CDD:270968