DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and GDPD3

DIOPT Version :9

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_199144.3 Gene:GDPD3 / 834348 AraportID:AT5G43300 Length:370 Species:Arabidopsis thaliana


Alignment Length:363 Identity:85/363 - (23%)
Similarity:142/363 - (39%) Gaps:61/363 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 IGHKGSGNTYRLGSD----VVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQ 430
            :||:|.|.......|    .::||:|..|..|.....|.:|.|||:|:|...|::|| :..|..:
plant    38 MGHRGFGMNMLQSPDEKMKFIKENSLLSFNVAADFPIDFIEFDVQVTRDGCPVIFHD-IFMFTQE 101

  Fly   431 RMPSFEDLLENQDLLIFAYENLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGC 495
            :....|..:...||    :|.|:.       |.:|......|:    :.:.|:.::..:...|. 
plant   102 QGVIIEKRVTEMDL----HEFLSY-------GPQRDGTNVKPM----WRKTKDGRIFEWKVEKD- 150

  Fly   496 DKSC---DRMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPTFDRNFYV 557
            |..|   |..|                |:...:||.||:|:...|   .:..|..:.|      :
plant   151 DPLCTLEDAFL----------------NVKHSLGFNIELKFDDNT---VYGEGELRQT------L 190

  Fly   558 DTILEIVLNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLEDPHSPVQYADQRVSVQDVAVRF 622
            |.||.:|...:..|.|:|.||..|...::|..|..|||..|...  ....|.|.|.:..|.|::.
plant   191 DNILTVVNEHSKNRPIIFSSFHPDAARLIRNMQRCYPVFFLTNG--GCEIYKDVRRNSLDEAIKL 253

  Fly   623 CNSLEFLGLTLHANSLLNKPSTMAYLHQINLDAFVYGSSTIDLEIRNKLKKHGVLGIIYDRLDQL 687
            |......||.....::|..|:.:..:....|....||.....:|:.......||.|:|.|.:..:
plant   254 CKESGLQGLVSEVKAILRTPNAITRVKDSKLSLLSYGQLNNVVEVIYLQYLMGVEGVIVDMVKDI 318

  Fly   688 DQV--------GEELEG--DTMCTIDSVTTRRVIQETE 715
            .:.        .::.||  :..|.|.....|:.::.|:
plant   319 SEAIANIEVTNEDDCEGEDERKCLIRFGEERKKVEITK 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 79/320 (25%)
GDPD 372..685 CDD:281062 78/319 (24%)
GDPD3NP_199144.3 PI-PLCc_GDPD_SF 36..315 CDD:301322 79/320 (25%)
GDPD 40..313 CDD:281062 77/316 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 104 1.000 Domainoid score I2222
eggNOG 1 0.900 - - E1_COG0584
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D687958at2759
OrthoFinder 1 1.000 - - FOG0001717
OrthoInspector 1 1.000 - - mtm976
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22958
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1268
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.920

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