DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and SRG3

DIOPT Version :10

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_566159.1 Gene:SRG3 / 821175 AraportID:AT3G02040 Length:361 Species:Arabidopsis thaliana


Alignment Length:349 Identity:73/349 - (20%)
Similarity:134/349 - (38%) Gaps:67/349 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 RKNRLCMNIGHKGSGNTYRLGSDV----VRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHD 422
            :.|...:.:||:|.|.......|:    ::||::..|..|.....|.:|.|||:|:|...:::||
plant    29 KANNKFVVVGHRGHGMNMSQSPDLRFSALKENSILSFNAASKFPLDFIEFDVQVTRDGCPIIFHD 93

  Fly   423 FVLRFMLQRMPSFEDLLENQDLLIFAYENLNKLML---LAMGGSKRKDLIAVPLEAFSYDQLKEV 484
                          |.:.:::..:...:.:.::.|   ::.|..:.......||...|    ||.
plant    94 --------------DFIYSEEQGVVYEKRVTEVCLSEFMSYGPQRDTGKTGKPLLRKS----KEG 140

  Fly   485 KVLRFAGSKGCDKSCDRMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKP 549
            |:.::  |...|.|          |..|.:..::...| ::||.||:|                 
plant   141 KIHKW--SVATDDS----------FCTLQEAFEKVENP-NLGFNIELK----------------- 175

  Fly   550 TFDRNFYVDT---------ILEIVLNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLEDPHSP 605
             .|.|.:..:         ||::|.:....|.|:|.||..|...:||..|..|||..|...  ..
plant   176 -LDDNVFYSSDHLSRLLLPILQVVSDIGNDRTIIFSSFHPDAALLVRKLQTTYPVFFLTNG--GT 237

  Fly   606 VQYADQRVSVQDVAVRFCNSLEFLGLTLHANSLLNKPSTMAYLHQINLDAFVYGSSTIDLEIRNK 670
            ..|.|.|.:..:.|::.|......|:......:...|:.:..:.:..|....||......|....
plant   238 EMYHDTRRNSLEEAIKVCLEGGLQGIVSEVKGVFRNPALVNKIKESKLSLMTYGKLNNVAEAVYM 302

  Fly   671 LKKHGVLGIIYDRLDQLDQVGEEL 694
            ....|:.|:|.|.::::.:...|:
plant   303 QHLMGIEGVIVDHVEEITEAVREM 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 71/331 (21%)
SRG3NP_566159.1 PI-PLCc_GDPD_SF 35..316 CDD:472694 71/331 (21%)
Blue background indicates that the domain is not in the aligned region.

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