DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and gdpd2

DIOPT Version :9

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_005173341.1 Gene:gdpd2 / 563198 ZFINID:ZDB-GENE-081107-62 Length:523 Species:Danio rerio


Alignment Length:401 Identity:84/401 - (20%)
Similarity:142/401 - (35%) Gaps:128/401 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 ITC---ASTHRPLMEMC-----VRYLIIRPLPNFRCDLSHSYERYWRKNRLCMN----------- 369
            |:|   .|.||.....|     :.:|::.... |.|.|:           :|..           
Zfish   161 ISCLVFQSYHRAKTTACKIFIMMTFLVVSAAV-FLCPLA-----------ICSPCITSNLPPKPA 213

  Fly   370 -IGHKGSGNTYRLGSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMP 433
             |||:|:       ..:..||||..|::::.......|.||||::|.:..:.||....|:| |..
Zfish   214 LIGHRGA-------PMLAPENTLMSFRKSLEFGVVAFETDVQLSKDKKPFLMHDCGKNFLL-RTT 270

  Fly   434 SFEDLLENQDLLIFAYENLNKLMLLAMGGSK---RKDLIAVP---LEAFSYDQLKEVKVLRFAGS 492
            ..:|....:|    ...|.....|..:...|   |.|    |   |.:.|.::.:|      |.:
Zfish   271 DVKDKFPGRD----GSNNFTLQELKTLNAGKWFSRSD----PFWTLSSLSEEERRE------ADN 321

  Fly   493 KGCDKSCDRM-LLEQRPFPLLLDLLDEENLPV----DMGFLIE-----------IKW--PQMT-N 538
            :......:.: |:::....|:.||.:|.|..|    |..:..|           |.|  |:.. :
Zfish   322 QTVPSLSELLDLVKKHNVSLIFDLKNENNSTVFQSSDSFYTTETINKLGISPDKIWWLPPEYRHD 386

  Fly   539 MRRWESGSFKPTFDR--------------NFYVDTILEI-------------VLNKAGKRRIVFC 576
            :.:.|.| ||..:::              ||...:.|||             |:|:.....:::|
Zfish   387 VMKMEPG-FKQVYNKQKEMLMDGGNFMNMNFSSLSALEISELRKSNVSVNLWVVNERWLFSLLWC 450

  Fly   577 ----SFDADICAMVRFKQNVYPVTLLLEDPH-SPVQYADQRVSVQDVAVRFCNSLEFLGLTL--- 633
                |...:.|.:  ||....|      |.| .|..|....::...|::     |..:||.|   
Zfish   451 SGVSSVTTNACHL--FKDMSKP------DWHLEPNMYKGIWIATDIVSL-----LLMIGLFLWQR 502

  Fly   634 HANSLLNKPST 644
            ...|.:..|:|
Zfish   503 RRKSYIYPPNT 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 73/349 (21%)
GDPD 372..685 CDD:281062 71/333 (21%)
gdpd2XP_005173341.1 GDPD_GDE3 188..501 CDD:176551 74/360 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0584
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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